| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00090 |
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| Symbol | |
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| ID | 8393901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 11947 |
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| End bp | 18792 |
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| Gene Length | 6846 bp |
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| Protein Length | 2281 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644984784 |
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| Product | Mg-chelatase subunit ChlD |
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| Protein accession | YP_003142434 |
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| Protein GI | 257062762 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.4181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGGGT TGCTATCCAA ATTAAAGCTG AAGAAGAAAG CAGCTGCGAT CACAGCAATG
ATTGCGCTTG CGGTCGCCAC TTTGGGCGTC ACAGCTTTCA CAGCTTTCGG TGCTGCGGGT
ACTACGCCTC CGCACACGAA GAATCTTACA GACAATCACG ATGGCACGTA CACCATCTCT
CTTGATGTGG TGGGCGAATC GGAGAGGAAG CCGAACCCCG TCAATGTCAT CGTGATTCTG
GATAACTCGG GATCCATGGA TACGAGGACT GGCGGATACG GATCTCAAAC GCGTATGGCT
GCCGCACAAA ACGCGGTTAA CAACCTCGCG AGGTCGCTCT ACGCATACAA TACAACAGAG
TTCCCGGACC TGGTTCAAAT GGCGCTCGTG GGCTTCTCCA CGACTGGCAG TGTTGTCCAA
GGTCCGACAA ATAGCTACAA CACGTTCTCC GGTGCTGTGA ACAGATTGGA CGCCGACGGC
GGCACCAACT GGGAGGACGC CCTCCAGGAC GCTGCGGGAA TCAACTTCAA CGACGACGAT
CCCACCTACG TGATCTTCGT CTCCGACGGC AACCCTACGT TCCGCAACAC GCGCGGCAAC
TATAACCCCA TGGATAATTA TTACTACAAT ACATGGGGTG TCTATGGTAA TGGTAGCGAT
TCGCAGACGG TAGCGGGCAT TGCGGCGGCC ACGACCATCG CGCGTTGCTA CGAGCATGCT
GTCGATGATG CAGAGTCACT CGCAACGAGC GTTGGCGCAG ACCACTTCTA CACTATCGGT
GCCTACGGCA ACGTTGACCG CATGCGGAGT CTGACCACAG ATGCCGGCGC GCCTGCGGGC
AACTACTTCT CCGCTGCGAA CACGACCGAT CTCCAGAATG CTCTGGCTGC GATTCTCGCC
CAGATCGAGA AGGCGGGCAT CGGCTCCGTC GAGATTGAGG ACGGCACCAC TAACCAGGTG
GCCACCTCCT CAGGTGTTGC CGAGCTGCTC GAGGTCGACA CCTCCTCCTT CCAGTACTAC
AAGGACGGCG TCGAGTGGGC GGATGCCCCT GAGGCAGAGT TCGTGAACGG CGCGGTCGAG
TGGGACCTCT CCTCGGTTGG TGTCCTCGAC GACGGCGTGA AGTACACCGT CACCTTCGAC
TGCTATCCCA GCCAGTACAC TTATGACACT ATCGCCAGGC TGAAGAATGG CGACCTTCAA
TACTCCAAAC TTGACCCTGA GGTCCAGAAA TACATTGTTG ATAACGGAAA CGGCACTTAT
TCGCTTCGCA CCAATACCAC CGCGACGCTT GATTGGGACG ACACTCGTAC CGACGATGAC
GAAAAGGCGG TTACTTACGA TAATCCCGAT CCCGTTCGCA CCGACTCCTC CACTCTGCCG
GTGAACAAAG AGTGGGAGGG TGGCACCCCC GATGTTGATG AGCTCGACAT CACCGTCATG
ATGGACGGGA CCACGGAGTT CCACACCGCC ACGATTTCCG ACGACAACGG TTGGGCCACG
AGCTCCTTCA TCTCTCCCGG CATCATCAAG AACGGCAAGG TGCTGAGTGG CGCCGAGGGC
CATGACTTCA ATTTTGCCGA GCTTGGCGAC GAGCAGTATC ACTGGGAGCT CGATTCTCCG
ACCGTGCACC CGATGCTTAT CAATGGCACG CTGACCATGC TCGTAAAGGT TGACGGTACA
CACCCCGCTC CTTCCGGTGC AACAACTTAC GAGTTCAATA ACGCCACCTA CTACGTGGAC
AATGCAGCTG CCGGCCTGAC GGCCACCAAC CACCGTCGTT CCAACCTGAA CCTGACTAAG
GTTGTTACCG GCGAGGACGC CCCTGCAGAC GCCACGTTCC CGTTCACGCT GACGGTCAAC
AACTCCAAGG CTCCCGCGAC CGAGCCCACG GACGACCCCG ACCACAACTC CGACTACTGG
GTTTGGTTCT CGATCTACGA CACCAAGGCT GGCGCCACCG TTACGGACGC CACTGTCTCC
GGCTCGGGCG TTGTTGGTCC TAGTGCCAAC GGCTACTACT ATGCCCCCAG CGGCACTGCT
ATCTCCGTCC AGATGAAGGC CAATTGGAAC CTCCGCTTCA CCAACCTGCC TTCCGGCACC
ACGTACACCT TCGCGGAGGG CACTCTTGCC GACGGCTTCG CCTTCAACAA GGCCGAACTG
ACCCAAGGGA CTGATACCAC CTTCTCGGCA GGCCAGACCT CCACGGGCAC CATCCAGAAC
ACCAAGACGA GCTATACCGT CACCTACACC AACGACTACG CCCTCACCAA CCTCGAGATC
ACCAAGGTTT GGGCCGACAA CCATGACCAG GACGGCAAGC GCCTGAGCGC CGATGAACTC
AAGGCCAAGC TGAAGCTTTC GCCCTCAGTT GAAGGCGCCG AGCCGACCGT TGTCGATAAC
GATGATGACA CCTACACCAT CACCTACACT GGCCTGCCGC GCTTCAACAA TGGTGAAGAG
GTCGAGTACA CAGTGACCGA ATCTGCCATC GATGGTTACA CCACCACTGG CAGCCCTGCG
AAGGACCACG GCACCATTAC CAACACCCAT ACGCCTGAGA CCACTGAGGT CACTGTCGTG
AAGGTCTGGG ACGACTCCGA TGATATCGGC AAGATCCGTC CGGGCTCCAT CAACGCTCAG
CTGACCGCCG ACGGCACCGC CTCCGGCGAC CCCGTTGCGC TGAACGCTGA CAACGAGTGG
ACCTACACTT GGGAGAACCT GCCCAAGTAC AAGGACGGCA AGGCAATTGA GTACTCTGCC
GACGAGACTG CAGTGCCCGC TGGCTACAAG AAGACTGGCC CCGTGAAGAC CGAGACCGAC
ACCGGTGTCA CCTTCACCGT GACCAACACC TACAATCCGA AGCCCGTCTC TGTTGACCCG
CCTGTCCAGA AGGTCATCAC CGGCAAAGAC GACCTCTACA ACAAGGGTGA CTTCACCTTC
AAGATTGAGG CTGTGACCGA GGGTGCCCCG ATGCCCGAGA ACACGAGCAT CACCAACAGC
GCTGATTACG AGTTTGAGGG CAAGACTGGC TTCTACGAGT TTGGCGAGAT TACCTTCACC
AAGCCTGGCA CCTACACCTA TAAGGTGACC GAGTCCGGCG ACGTCGACGG CGTTACCAAC
GACCCGGCTG CCGAGACCGG CAAGGAGCTC ACCTTCACCG TGACCGACGA CGGCACGGGC
AAGCTGGTCG TGGACCCGAC CACCGACCAG GTGCAGCTCT CCTTCACCAA CGTCTACGAT
GCCGACGGCG AGGCGAGCAT CGTCGTGAGC AAGGAGATTG CTGGCGCTGC CTGGCCTGCT
GGCAAGACCC TGACGCTCAC CATCGCTGGT GCCAATGGCG CTCCGATGCC CGATAACACC
ACCGCCACTC TTGATGCTGC TGGCAGTGTG ACCTTCGGCC CCATCAAGTA TGGTCTGTCT
GACAAGGACA AGGAATACAC CTACACCATC ACCGAGGACA GCTTTGGTGC CGGCTGGTCT
GGCGCGCCCG CTTCCGTCAA GGCTACCGTC AAGGTTTCCG ATAACGGAGA CGGCACCCTG
AAGGCCGACG TTACCTACGA CCCGACCGAT GCTAAGTTCA CCAACACCTA TAAGGCAACT
GGCAACGCTA CCCTTGAGGT CGAGAAGAAG CTCGAGGGTG CTGCATGGCC CGAGGGCAAG
ACCCTGACTA TGACGCTCGC CGGCCAGGAT GGCGCTCCGA TGCCCGCCGA GGGTGGCGAG
ACCGTTAAGC TGACCGCGGC AGGCAAGGCG ACCTTCGGTG ACATCACCTA CACCGAGGCC
GACATCAACA AGACCTACAC CTACACCATT TCCGAGGATG GCTTCGGCAA CGGTTGGACC
GGCTCCGGCG ACGTGACCGC CACAGTGAAG GTCACCGACA ACGGCGACGG CACGCTGAAG
ACCGAGGTCA CCTACAGCCC TGAAAATGAC ACCATCACCA ACACCTACAA GGCAGCTGGT
GAGATCGAGC TCTTCGCTGG CAAGAAGCTT GAAGTTGAAA GCGGAAACAA TGCTCCCGAC
GTGACCGGCA AGTACACCCT GACTCTCGAA GCCCAGGATG GCGCCCCGAT GCCTGAGGGT
GCCACCGACG GCAAGGTCGA GATCAAGAAC GCTGACGGCG ACGGCACCAT GACCACCTTT
GGCAAGATTG CCTTCACCGA GGCCGACGCC GGCAAGACCT ATACCTACAA GGTCACCGAG
ACCGGCACCG TTGACGGCGT CGTGAACGGT ACCGCCGAGT ACACCGTGAC CGTCGAGGTT
ACTGACAACG GCAACGGCAC CCTGACCGCA ACCGCTACCC CGGATGCTGA GACGCTCTTC
ACTAATACAT ATGAGGTTGA GCCCACCACG GCCAGCTTCC CTGTGAAGAA GGTTGTTAGC
GTGCCCGAAG GACAGACTGG TCCTGCCGAG TGGAGCTACG ACATTGCAGT TGCCGCCAAT
GACGGCGCAC CTGAGGTCGA GACCATGACC GGCACGGTCG ATCAGGACAG CGACACCGCA
AACTTCGGTC CGTTTACGTT CGATGCTCCT GGCACTTACA CCTACACCGT TACCGAGACC
GGTACCGTGG CTGGCATCAC CAACGATGCC GACGCAACGA CTGGCAAGAT TGTCACCATC
ACCGTTGTTG ACAACGGCGA CGGCACCATG ACTGCAACGG CTGACTCCAC CGAGGAGAAC
CCCGTCACCT TCACCAACAC CTACAGCGTG GAGCCTACGA CCGCTGAGTT CCCGGTGAAG
AAGATCATGT CCGTGCCCGA GGGCGTCGAC GGTCCTTCTA AGTGGTCTTA CACCATCGGT
GTTGCTGCCG GCGAGGGTGC ACCCGAGGCC GAGGCCATGA CCGGCACGGT CGACCAGGAC
AACGACACTG CCACCTTCGG TCCGTTTGAG TTCACTGCTC CTGGCGAGTA CACCTACACC
GTGACCGAGA CCGGCACCGT TGCAGGCGTC ACCAACGACA CCGCCGCATC TACCGGCAAG
ACCGTTACCG TGACCGTGGT TGACAACGGC GACGGCACCA TGACTGCAAC GGCTGACTCC
ACCGAGGAGA ACCCCGTCTC CTTCACCAAC ACCTACAATG TCGACCCTGC AACGGTTGTA
ATCCCGGCAA CGAAGGTTCT TGAGATTCCT GAAGGCTTGG ATGGCCCGGA GAACGCTTCC
TGGACGGTCA GCATTGCTGC CGCCTCCGAC GGCGCCCCGA TGCCTGAAAC CACTGAGTAC
ACCGTGGCCC CTGGCCAGAC CGTGAGCTTC GGAGATATCT CCTTCGCAAA GCCTGGCGAC
TACCAGTACA CAGTTACCGA GTCCGGTACC GTCCCTGGTG TTACCAACGG GCAGGAAAAC
TACACTGTCA AGGTTTCCGT TGTCGACAAC GGCGATGGCA CCCTGACTGC TACGGCTGAC
TACAACGAGG AGAACCCGGT CACCTTTACC AACAAGTACA ACGCCGAACC GACCAAGGCT
GCTCTCGAGG TGATGAAGGA CCTCACCGGC ACCCCGCTGA CTGCTGGCGC CTTCGAGTTC
GAACTCACCT TCGGTGACGA AGTGATCCAG ACCAAGACCA ATGATGCAAA CGGCATCGTC
AATTTCGACG AGATCACTTA CGAAAAGCCC GGCACCTACA CCTACACCAT CTCCGAGAAG
AACGGTGGCA AGGGTGGCTA CAGCTACGAT ACCAACACCG TTACCGCTAC CGTTACGGTG
ACCGACAATC GTGAGGGTGG CCTCGTGGCC GACGTTACGT ACAGCGGCGA CACCACGTTC
AAGAATACCT ATGAGGCTTC CGGCGATGTG GATCTGAGCG CTGCCAAGAA GCTCACCGGT
CGTACGCTTG AGGCTGACCA GTTCTCCTTC GAGCTGCTGG ATGCTGACGG CAACGTGATC
GAGACCGTGA CGAACAATGC TTCCGGTGCG GTTCAGTTCA GCACTTTGAA CTACGACCAG
ACCATCTTCG ATGATCAGGC AACCGATGAG GCTGCTGCCG ATGATCAGGC AACCGGCGAT
GACGCCGTGA CTGGCCTTGA GGATGTCGCA GCAACCGACG AGACTGCTAC CGACGAAGCT
GCCGCAACCG ACGAGGGTGC CGCTGAAGAG ACCGACGCTG AGGCTGCCGC AACCGACGAG
GCTGCCGAAG GCGAAGCTGT CGAAGGCGAG GCTGTCGAAG GCGAGGCTGC TGCTGAGGAG
ACCGACGCTA AGGCTGCCGA TGCTGCCGAG GCCGAGGTTG TCGAAACCGC AGCCGAAGCC
GAAGCCGAAC CGCGCACCAA GACCTTCAAC TACACCATCC GTGAGGTTGC AGGCGATGCT
GCAGGCTACA TCTACGACAC GCACGAAATC GGCGTGACCG TGACCGTGAC CGACAACGAC
GACGGCACCC TGACCGCAGT TCCCGAATAC AGCGGTGAGA CCACCTTCGT CAACACCTAT
GAGGCATCTG GTGAGGCGCA GTTCAACGGC ACCAAGACCG TCGAAGGCAC CGAGCTTGCC
GAAGGCCAGT TCACCTTCCA GCTGAAGGAT GAAAAGGGCG CAGTGCTGAG CGAAGCCACC
AACGATGCTG ACGGCAACTT CAGCTTCGAC GTGATCAACT ACGCTCAGAA CGCCGAGCAG
ACCGATGCCG ACACGGGTAC CTTCAAGTAC ACGATCGTCG AGGTCAACGA CGGCCAGACT
GGTTACACCT ACGACAGCCA TGTCTGCGAT GTGACCGTGA CCGTGACCGA CAACGGCGAC
GGCACCCTGG GCCACCGAGG TCGAGTACTC CGACGGCGAA GCCGCTGCGT TCGTGAATCC
GTACCAGCCG CTGGCTACCA GCATCAACCT GTACGGCACC AAGGTGCTCG AGGGCCGCGA
CCTTAA
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| Protein sequence | MVGLLSKLKL KKKAAAITAM IALAVATLGV TAFTAFGAAG TTPPHTKNLT DNHDGTYTIS
LDVVGESERK PNPVNVIVIL DNSGSMDTRT GGYGSQTRMA AAQNAVNNLA RSLYAYNTTE
FPDLVQMALV GFSTTGSVVQ GPTNSYNTFS GAVNRLDADG GTNWEDALQD AAGINFNDDD
PTYVIFVSDG NPTFRNTRGN YNPMDNYYYN TWGVYGNGSD SQTVAGIAAA TTIARCYEHA
VDDAESLATS VGADHFYTIG AYGNVDRMRS LTTDAGAPAG NYFSAANTTD LQNALAAILA
QIEKAGIGSV EIEDGTTNQV ATSSGVAELL EVDTSSFQYY KDGVEWADAP EAEFVNGAVE
WDLSSVGVLD DGVKYTVTFD CYPSQYTYDT IARLKNGDLQ YSKLDPEVQK YIVDNGNGTY
SLRTNTTATL DWDDTRTDDD EKAVTYDNPD PVRTDSSTLP VNKEWEGGTP DVDELDITVM
MDGTTEFHTA TISDDNGWAT SSFISPGIIK NGKVLSGAEG HDFNFAELGD EQYHWELDSP
TVHPMLINGT LTMLVKVDGT HPAPSGATTY EFNNATYYVD NAAAGLTATN HRRSNLNLTK
VVTGEDAPAD ATFPFTLTVN NSKAPATEPT DDPDHNSDYW VWFSIYDTKA GATVTDATVS
GSGVVGPSAN GYYYAPSGTA ISVQMKANWN LRFTNLPSGT TYTFAEGTLA DGFAFNKAEL
TQGTDTTFSA GQTSTGTIQN TKTSYTVTYT NDYALTNLEI TKVWADNHDQ DGKRLSADEL
KAKLKLSPSV EGAEPTVVDN DDDTYTITYT GLPRFNNGEE VEYTVTESAI DGYTTTGSPA
KDHGTITNTH TPETTEVTVV KVWDDSDDIG KIRPGSINAQ LTADGTASGD PVALNADNEW
TYTWENLPKY KDGKAIEYSA DETAVPAGYK KTGPVKTETD TGVTFTVTNT YNPKPVSVDP
PVQKVITGKD DLYNKGDFTF KIEAVTEGAP MPENTSITNS ADYEFEGKTG FYEFGEITFT
KPGTYTYKVT ESGDVDGVTN DPAAETGKEL TFTVTDDGTG KLVVDPTTDQ VQLSFTNVYD
ADGEASIVVS KEIAGAAWPA GKTLTLTIAG ANGAPMPDNT TATLDAAGSV TFGPIKYGLS
DKDKEYTYTI TEDSFGAGWS GAPASVKATV KVSDNGDGTL KADVTYDPTD AKFTNTYKAT
GNATLEVEKK LEGAAWPEGK TLTMTLAGQD GAPMPAEGGE TVKLTAAGKA TFGDITYTEA
DINKTYTYTI SEDGFGNGWT GSGDVTATVK VTDNGDGTLK TEVTYSPEND TITNTYKAAG
EIELFAGKKL EVESGNNAPD VTGKYTLTLE AQDGAPMPEG ATDGKVEIKN ADGDGTMTTF
GKIAFTEADA GKTYTYKVTE TGTVDGVVNG TAEYTVTVEV TDNGNGTLTA TATPDAETLF
TNTYEVEPTT ASFPVKKVVS VPEGQTGPAE WSYDIAVAAN DGAPEVETMT GTVDQDSDTA
NFGPFTFDAP GTYTYTVTET GTVAGITNDA DATTGKIVTI TVVDNGDGTM TATADSTEEN
PVTFTNTYSV EPTTAEFPVK KIMSVPEGVD GPSKWSYTIG VAAGEGAPEA EAMTGTVDQD
NDTATFGPFE FTAPGEYTYT VTETGTVAGV TNDTAASTGK TVTVTVVDNG DGTMTATADS
TEENPVSFTN TYNVDPATVV IPATKVLEIP EGLDGPENAS WTVSIAAASD GAPMPETTEY
TVAPGQTVSF GDISFAKPGD YQYTVTESGT VPGVTNGQEN YTVKVSVVDN GDGTLTATAD
YNEENPVTFT NKYNAEPTKA ALEVMKDLTG TPLTAGAFEF ELTFGDEVIQ TKTNDANGIV
NFDEITYEKP GTYTYTISEK NGGKGGYSYD TNTVTATVTV TDNREGGLVA DVTYSGDTTF
KNTYEASGDV DLSAAKKLTG RTLEADQFSF ELLDADGNVI ETVTNNASGA VQFSTLNYDQ
TIFDDQATDE AAADDQATGD DAVTGLEDVA ATDETATDEA AATDEGAAEE TDAEAAATDE
AAEGEAVEGE AVEGEAAAEE TDAKAADAAE AEVVETAAEA EAEPRTKTFN YTIREVAGDA
AGYIYDTHEI GVTVTVTDND DGTLTAVPEY SGETTFVNTY EASGEAQFNG TKTVEGTELA
EGQFTFQLKD EKGAVLSEAT NDADGNFSFD VINYAQNAEQ TDADTGTFKY TIVEVNDGQT
GYTYDSHVCD VTVTVTDNGD GTLGHRGRVL RRRSRCVRES VPAAGYQHQP VRHQGARGPR
P
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