Gene Apre_1852 details

Gene Information

• Locus tag: Apre_1852
• ID: 8368759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013164
• Strand: +
• Start bp: 114859
• End bp: 115464
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 644984775
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003142426
• Protein GI: 256821227
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000213283
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATTT TGTTAATAGA AGATCATAAA ATGGTAGCTA CTTCTCTAAA AATGAGCTTG 
GAAAAAGAAA ATTCGATTAC TGTGGATATA ATAAATAATG TTAGTGAACT TGATATAGAT 
AGTATAATTT CAAGTTATGA ATTATTACTT ATAGATATTA ATTTAACAGG TATTGAAGGA 
ACAGTAAATG GTTTGGACTT AGCTGAAAAA TTAATAGAAA AATATAGAGA TATTAAAATT 
GTTATTTTAA CAGCATATAA ATTAGATTTT TATATAAAAA GGGCAAAGAA AATAGGGTGT 
AGAGGTTTTA TTTCCAAAGA AGAAGAAACA AATAAACTAA TCCAGAATAT AAAAAATATT 
GTAGAAAAGG ATAAGATAAT ATTTCCAGAA GAAAACCGTA TGTTAGAGCC GTTGACAAAA 
TGTGAATTAA AAATAGTGAG ATTATATTCG GAAGGTATGT CTAGGAAAGA GTTAGCTAAA 
GAACTAAATA CAAATGTAAG AAGTTTAGCA GTATCTTTAT CAAGAATATA TCAAAAGTTA 
GGTGTTAGAA ATTACCAAGA AATGATAGAT AAAGTGCGTG AATTAGGATA TGTTGATTCA 
TTTTAG 

 

Protein sequence

MRILLIEDHK MVATSLKMSL EKENSITVDI INNVSELDID SIISSYELLL IDINLTGIEG 
TVNGLDLAEK LIEKYRDIKI VILTAYKLDF YIKRAKKIGC RGFISKEEET NKLIQNIKNI 
VEKDKIIFPE ENRMLEPLTK CELKIVRLYS EGMSRKELAK ELNTNVRSLA VSLSRIYQKL 
GVRNYQEMID KVRELGYVDS F