Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1840 |
Symbol | |
ID | 8368747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013164 |
Strand | + |
Start bp | 103643 |
End bp | 105418 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 644984763 |
Product | ABC transporter related |
Protein accession | YP_003142414 |
Protein GI | 256821215 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.301494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAGG ATAAAATAAA TCATCTTGAA TGTATAAAAA TAGCATTCAA GATGATTTAT GAAACAGATA AAAAGTCTTT TGCGATCATT ATTATATTGT CAATTGCAAG TGGTATTTTT CCTTTTTTAG TACTTAGATT AGGACAGACA ATAGTTAATA TAATTCAAGT TCATTCTATT AAATTTGATA TCATTATAAG GCTTATATAT ATATATTTAT CTTTACAATT TATATCTATA ATAGTAGATA ATATTAAAAA TTACTATTTA CAAAGATTGA GTAATGAAGT TATTTATTCT TCCATGAGCA AAGTAATGGG AAAATGTGCT GATTTACCTT TAAAAAAGCT TGAAGATAAT AAAACTTATG ATATTTTGAA TAGAATAGAG CAGGATGCTA CATTAAAGCC ATATGAAATA TTAATGGCGG TTATAGGTTT ATTTTCTAGT TTGACACAGA CTATTATAGC CATATATGTA TTAATTAAAT GGAATTATTA TCTGGTTCTT CTTTTGTTTG TAGTTACCAT TGTATCAGTA TTTGGAGAAA TAAGAATAGG TAAATTAGAG TTTAATATTA GAAATAGAAG GAGTAATTTA GAGAGGAAAA GTTGGTATTA TTCTTTTTTA TTAACCCATG ATATTGCTTT TAAGGAGATC AAAACTTTTA GGTTGAAAAA TTATTTTCTT AATAAGTATA CAGAAATAAC AGATACTATT ATTAATCAAA ATAATAGCAT TGAAAAATTG AAAGCTATAT TAATAATTGT TATAAATTTT ATTCAAATTC TTATTAATAT ATATATATTT AAAGAACTTG CATTTAAAAC GTATAATGGA GACTTTTTAA TTGGAACAGC TATGATGTAT ATAAACACAA TTGCTATATT TCAAGGTTCT CTTAATGAAA CAGGAACTAG TGTATACAAT ATTATTAATT CAAATTTATA TATAAATTTA CTTAAAGAGT TTCTTGAATT TAAAACTGAC GATTTAAAAG AAGAGACAAA AACTATACTA AGATCAATAA AAGACATTAA TGTAATATCG TTATCTAATA TAAACTTTTC TTATGATGAT AATAGTTTAG CTCTGCAAGA CATTTCTTTA AAGATAAAAA AAGGAGAATC CATTGCAATA ATTGGGGAAA ATGGTTCAGG AAAAAGTACA CTTCTAAAAA TTTTAGCTGG ATTGTATAGT CCAGATTCAG GTGTGTTTTT AATTAATGGG ATGAAATTTG ATGATATTGA AATAGAATCT TATAGAACAC AGATTAGTTC ATTATTTCAA GATTATTTGA AATATGAGGG GACAATAAAA GAGAATATTA TATTAGGGCA AATTGATAGA AATGAAGACG ACTTTTCGAT TCTAACAGCA TTAAATAGTG CTGATGCAAA ATTTTTAAAA AATGATGGTA AATATAATAT TAATAAAGTA GTAGGTAATT GGTTTGAAAA TGGGCAGGAA CTTTCAGGCG GACAATGGCA AAAAATTGCA ATAGCACGAA CTATGTATAG AAAATCAAGT CTATTGTTAT TTGATGAGCC AAGCTCGTCA TTAGACATAA TTTCTGAAAA AATCATATTT GATAATATTT TAAATAATTT GAATGATAAG ATTATTATAT ATATCACCCA TAGGATAAGA TGTGCGATGA ATTCTGATAG AATTATTGTG ATGGATAATG GAAAAATAGT AGGTGATGGG AGTCACGATG ATTTAATTGA AAACTGTAAT AGATATAAGT TAATGTATAA TAAGGAATTT AAGTGA
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Protein sequence | MGKDKINHLE CIKIAFKMIY ETDKKSFAII IILSIASGIF PFLVLRLGQT IVNIIQVHSI KFDIIIRLIY IYLSLQFISI IVDNIKNYYL QRLSNEVIYS SMSKVMGKCA DLPLKKLEDN KTYDILNRIE QDATLKPYEI LMAVIGLFSS LTQTIIAIYV LIKWNYYLVL LLFVVTIVSV FGEIRIGKLE FNIRNRRSNL ERKSWYYSFL LTHDIAFKEI KTFRLKNYFL NKYTEITDTI INQNNSIEKL KAILIIVINF IQILINIYIF KELAFKTYNG DFLIGTAMMY INTIAIFQGS LNETGTSVYN IINSNLYINL LKEFLEFKTD DLKEETKTIL RSIKDINVIS LSNINFSYDD NSLALQDISL KIKKGESIAI IGENGSGKST LLKILAGLYS PDSGVFLING MKFDDIEIES YRTQISSLFQ DYLKYEGTIK ENIILGQIDR NEDDFSILTA LNSADAKFLK NDGKYNINKV VGNWFENGQE LSGGQWQKIA IARTMYRKSS LLLFDEPSSS LDIISEKIIF DNILNNLNDK IIIYITHRIR CAMNSDRIIV MDNGKIVGDG SHDDLIENCN RYKLMYNKEF K
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