| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2191 |
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| Symbol | |
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| ID | 8368652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2610591 |
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| End bp | 2611379 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984645 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003142296 |
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| Protein GI | 256821017 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGAA AATTAAACAC AGCTAATAGC GTAATTGTGG CTTGTACATT GCTATTGGGT
ATAAGCAAAC TTGTAGTGTA TACTAACAAA GTAACACAAG AGCAGCTTAA TCAGTGGCTA
TGTATGCCTC AATCGTTACC TCTGTTTTTA AAACAACCTT GGACGCTCAT TTCTTATGCT
TTCTATCACG TAAGCATTCA ACACCTATTT TGGAATATGC TCCTGTTATT TTTCACAGGG
CATATTTTCT TCAATCTCTT TAACGGAAAA CAATTTGTAA AAGCGTATAG TTTTGGGATT
ATAGGTGGCG GAATCACTTT TCTAACCATA GGTCACTTCT TCCCCTCCTT CACTGATAAT
ACGATGCTCT TAGGAGCTTC AGCTGCTGTT ATGGGAGCCT TAGCCTTTGT GGTAACCCTG
TTCCCCTCCT ATAATGTCTA TATTTTTACC TTTAAAATAA AATTGCTGTA CGTTATATTG
GCTTTTATCC TTTTCGATAT ACTGAATATA TCAGTAAACA CAGGAGGTAA GATAGCCCAC
TTCGGAGGTA TTTTAGGAGG GATATTCGCA GGACTTACTT CAAAGTACAG TTTTCGTATT
CCTAAAAAAG CAAAAACGCC CCAAGAAGAG TCTCCTAAAA AAGAAAAGAA AGTCGTTTCA
GAAGAACAAC AGATACGAGC ACATCAGGTC AATCAACTGT TAGAGAAAAT CAGTGCCAGT
GGTTATGCAA GTTTAACCGA CCAAGAAAAG AAATTCCTCT TTGAAGTGAG CAAGGAGAAA
GAAAGCTAA
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| Protein sequence | MSGKLNTANS VIVACTLLLG ISKLVVYTNK VTQEQLNQWL CMPQSLPLFL KQPWTLISYA
FYHVSIQHLF WNMLLLFFTG HIFFNLFNGK QFVKAYSFGI IGGGITFLTI GHFFPSFTDN
TMLLGASAAV MGALAFVVTL FPSYNVYIFT FKIKLLYVIL AFILFDILNI SVNTGGKIAH
FGGILGGIFA GLTSKYSFRI PKKAKTPQEE SPKKEKKVVS EEQQIRAHQV NQLLEKISAS
GYASLTDQEK KFLFEVSKEK ES
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