Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2179 |
Symbol | |
ID | 8368640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2597624 |
End bp | 2599030 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644984633 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_003142284 |
Protein GI | 256821005 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT ACGACATTGT TATCATCGGT TCAGGTCCTG GTGGTTATGT AGCCGCTATT CGTGCAGGTC AATTGGGCTT TAAAACTGCC CTTATTGAAA AATATAATAC CTTAGGAGGC ACTTGTCTTA ATGTAGGCTG TATCCCTTCT AAAGCCTTAC TCGACTCTTC TCACCACTAC GAAAACGCCT CCAAACACCT CGAAGCCCAC GGTATTGAAA TCACAGGTAA AGTAAAGTTT AGCTTAGAGA AAATGATTGC TCGTAAGGCG GCTGTGGTAG AGCAAACTTG CGCAGGGGTA AAGTTCCTAA TGGAGAAAAA CAAAGTAGAC GTTTTTACCG GCGTAGGGAG CTTTGTATCA CCCACACAAA TTAAGATTAC TCCTAATAAA GGCAAGGCAG AGACCATAGA AGCCAAGCAC ACCATTATTG CTACCGGCTC TAAACCTGCC TCCTTACCTT TTATTGCGCT CGATAAAGAA CGCATTATTA CTTCTACTGA AGCTCTCCAG CTCAAAGAAG TACCAGAACA CCTCATCGTG ATTGGTGGGG GCGTAATAGG CTTAGAATTG GGGCAAGTAT ACAGTCGCTT AGGAGCTAAA GTGTCGGTAG TAGAATACAC CGATAGCATT ATCCCTACGA TGGATAGAGG CTTAGGGCGC GAACTCACCA AAGTACTCAA AAAACAAGGC TTTGCTTTCT ATACAGGTCA TCAGGTGAAA GAAGTAACTC GCAAGGGCAA AACGGTAACT GTAAAAGCTA CAACCTCCAA AGGCGAAGAG CTTACCCTTA AAGGTGATTA CTGCTTAGTA GCCGTAGGTC GTCGCCCTTA TACCGAGGGT CTTAACCTCG AAGTAGTAGG TGTACAGAAA GACGAGCGCG GTAGGGTAAT AGTAAACGAC CACCTGCAAA CCAATGTGCC TAACATCTAT GCCATAGGTG ATGTAGTACG CGGGGCTATG CTCGCCCATA AAGCCGAAGA AGAAGGCGTA TTGGTAGTAG AACAACTCGC TGGACAAAAA CCACATATCG ACTATAATCT TATCCCTGGT GTTGTTTACA CTTGGCCTGA AGTAGCTTCA GTAGGCAAAA GTGAAGAGCA ACTAAAAGCT GACAGCATCG CCTATAAAGT GGGGCAGTTT GCTTTTCGTG CCTTAGGGCG CGCCCGTGCC AGTATGGATA CCGACGGCTT TGTAAAGATT TTAGCTGACA CCCAAACCGA TGAAGTGCTC GGCGTACACA TCATTGGAGC TCGTGCTGCC GATATGATAG CCGAAGCCGT TACCGCAATG GAGTTCCGTG CTAGTGCCGA AGATATCGCT CGCATCTGCC ACGCTCACCC TACCTTTACC GAAGCAATAA AGGAGGCCGC CCTTGCTACC ACCGAAAACC GCGCTATCCA TAGTTAA
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Protein sequence | MKTYDIVIIG SGPGGYVAAI RAGQLGFKTA LIEKYNTLGG TCLNVGCIPS KALLDSSHHY ENASKHLEAH GIEITGKVKF SLEKMIARKA AVVEQTCAGV KFLMEKNKVD VFTGVGSFVS PTQIKITPNK GKAETIEAKH TIIATGSKPA SLPFIALDKE RIITSTEALQ LKEVPEHLIV IGGGVIGLEL GQVYSRLGAK VSVVEYTDSI IPTMDRGLGR ELTKVLKKQG FAFYTGHQVK EVTRKGKTVT VKATTSKGEE LTLKGDYCLV AVGRRPYTEG LNLEVVGVQK DERGRVIVND HLQTNVPNIY AIGDVVRGAM LAHKAEEEGV LVVEQLAGQK PHIDYNLIPG VVYTWPEVAS VGKSEEQLKA DSIAYKVGQF AFRALGRARA SMDTDGFVKI LADTQTDEVL GVHIIGARAA DMIAEAVTAM EFRASAEDIA RICHAHPTFT EAIKEAALAT TENRAIHS
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