Gene Coch_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2179 
Symbol 
ID8368640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2597624 
End bp2599030 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content47% 
IMG OID644984633 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003142284 
Protein GI256821005 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT ACGACATTGT TATCATCGGT TCAGGTCCTG GTGGTTATGT AGCCGCTATT 
CGTGCAGGTC AATTGGGCTT TAAAACTGCC CTTATTGAAA AATATAATAC CTTAGGAGGC
ACTTGTCTTA ATGTAGGCTG TATCCCTTCT AAAGCCTTAC TCGACTCTTC TCACCACTAC
GAAAACGCCT CCAAACACCT CGAAGCCCAC GGTATTGAAA TCACAGGTAA AGTAAAGTTT
AGCTTAGAGA AAATGATTGC TCGTAAGGCG GCTGTGGTAG AGCAAACTTG CGCAGGGGTA
AAGTTCCTAA TGGAGAAAAA CAAAGTAGAC GTTTTTACCG GCGTAGGGAG CTTTGTATCA
CCCACACAAA TTAAGATTAC TCCTAATAAA GGCAAGGCAG AGACCATAGA AGCCAAGCAC
ACCATTATTG CTACCGGCTC TAAACCTGCC TCCTTACCTT TTATTGCGCT CGATAAAGAA
CGCATTATTA CTTCTACTGA AGCTCTCCAG CTCAAAGAAG TACCAGAACA CCTCATCGTG
ATTGGTGGGG GCGTAATAGG CTTAGAATTG GGGCAAGTAT ACAGTCGCTT AGGAGCTAAA
GTGTCGGTAG TAGAATACAC CGATAGCATT ATCCCTACGA TGGATAGAGG CTTAGGGCGC
GAACTCACCA AAGTACTCAA AAAACAAGGC TTTGCTTTCT ATACAGGTCA TCAGGTGAAA
GAAGTAACTC GCAAGGGCAA AACGGTAACT GTAAAAGCTA CAACCTCCAA AGGCGAAGAG
CTTACCCTTA AAGGTGATTA CTGCTTAGTA GCCGTAGGTC GTCGCCCTTA TACCGAGGGT
CTTAACCTCG AAGTAGTAGG TGTACAGAAA GACGAGCGCG GTAGGGTAAT AGTAAACGAC
CACCTGCAAA CCAATGTGCC TAACATCTAT GCCATAGGTG ATGTAGTACG CGGGGCTATG
CTCGCCCATA AAGCCGAAGA AGAAGGCGTA TTGGTAGTAG AACAACTCGC TGGACAAAAA
CCACATATCG ACTATAATCT TATCCCTGGT GTTGTTTACA CTTGGCCTGA AGTAGCTTCA
GTAGGCAAAA GTGAAGAGCA ACTAAAAGCT GACAGCATCG CCTATAAAGT GGGGCAGTTT
GCTTTTCGTG CCTTAGGGCG CGCCCGTGCC AGTATGGATA CCGACGGCTT TGTAAAGATT
TTAGCTGACA CCCAAACCGA TGAAGTGCTC GGCGTACACA TCATTGGAGC TCGTGCTGCC
GATATGATAG CCGAAGCCGT TACCGCAATG GAGTTCCGTG CTAGTGCCGA AGATATCGCT
CGCATCTGCC ACGCTCACCC TACCTTTACC GAAGCAATAA AGGAGGCCGC CCTTGCTACC
ACCGAAAACC GCGCTATCCA TAGTTAA
 
Protein sequence
MKTYDIVIIG SGPGGYVAAI RAGQLGFKTA LIEKYNTLGG TCLNVGCIPS KALLDSSHHY 
ENASKHLEAH GIEITGKVKF SLEKMIARKA AVVEQTCAGV KFLMEKNKVD VFTGVGSFVS
PTQIKITPNK GKAETIEAKH TIIATGSKPA SLPFIALDKE RIITSTEALQ LKEVPEHLIV
IGGGVIGLEL GQVYSRLGAK VSVVEYTDSI IPTMDRGLGR ELTKVLKKQG FAFYTGHQVK
EVTRKGKTVT VKATTSKGEE LTLKGDYCLV AVGRRPYTEG LNLEVVGVQK DERGRVIVND
HLQTNVPNIY AIGDVVRGAM LAHKAEEEGV LVVEQLAGQK PHIDYNLIPG VVYTWPEVAS
VGKSEEQLKA DSIAYKVGQF AFRALGRARA SMDTDGFVKI LADTQTDEVL GVHIIGARAA
DMIAEAVTAM EFRASAEDIA RICHAHPTFT EAIKEAALAT TENRAIHS