| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2167 |
|---|
| Symbol | |
|---|
| ID | 8368628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 2584671 |
|---|
| End bp | 2585525 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644984621 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142272 |
|---|
| Protein GI | 256820993 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGT CAATGACAGG CTTTGGCAAG AGTGTACTAT CTCTCACCGA TAAACATATT
AGTATAGAAA TCAAATCCTT AAACAGTAAG AGTATTGATA TCAATACACG TATTCCACAA
GCGTATCGCG AAAAAGAACT CGATTTCCGT AAACTCATTG CCGAGCAGCT CTTACGCGGG
AAAGTAGATT TTAGTATCTT TGTAGAAAAT ACAGGCACAC AAACACCCTC TAAAATCAAT
CCTAATATCG TAAAATCCTA TATCGAGCAA ATGCGTGCTA TTGTTGATGG TGACCTTACC
GAACTGCTAA AAATGGCAGT ACGTATGCCC GATGCCTTAC AAACCACCAC CGAAAGCGTT
TCCGAAGAAG AACTTTCAGC TATTTTCGAA CATATCAGCC TCGCCATTAC CGATTTGCAA
TCCTTCCGCA TTCAAGAAGG TAAAGTTTTA GAAAAAGACT TCGTTTTGCG TATTAGTAAC
ATCGATAGCT TACTGCAAGA GGTACAAGCT CTTGATAGTG AACGCTTAGC GCTCATTCGC
GAACGCTTGG AAAAAGCAGT AGCTGATATC CAGAGTGTAG ACGCCAACCG CTTTGAGCAA
GAACTCATTT TCTACTTAGA AAAATTGGAC ATCACAGAAG AAAAAATCCG ACTCAAAAAA
CACTTAGACT ATTTTCTCGA AACCCTTCAC AGCGAAGATT CTAACGGACG TAAATTGAGT
TTTATTGCAC AAGAAATAGG CAGAGAAATC AATACCTTAG GTTCAAAAGC TAACTTCGCC
CCTATGCAAC AGTTAGTAGT CCAAATGAAA GACGAACTCG AAAAGATTAA AGAACAAGTT
CTAAACGTAT TATAA
|
|---|
| Protein sequence | MIQSMTGFGK SVLSLTDKHI SIEIKSLNSK SIDINTRIPQ AYREKELDFR KLIAEQLLRG
KVDFSIFVEN TGTQTPSKIN PNIVKSYIEQ MRAIVDGDLT ELLKMAVRMP DALQTTTESV
SEEELSAIFE HISLAITDLQ SFRIQEGKVL EKDFVLRISN IDSLLQEVQA LDSERLALIR
ERLEKAVADI QSVDANRFEQ ELIFYLEKLD ITEEKIRLKK HLDYFLETLH SEDSNGRKLS
FIAQEIGREI NTLGSKANFA PMQQLVVQMK DELEKIKEQV LNVL
|
|---|
| |