Gene Coch_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2150 
Symbol 
ID8368611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2566460 
End bp2567383 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content31% 
IMG OID644984604 
ProductDNA adenine methylase 
Protein accessionYP_003142255 
Protein GI256820976 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.184116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA ACACAAATCA CATAGCAAAA CCTTTCTTAA AATGGGCAGG AGGTAAAACA 
CAGCTCATAG AACAAATCAA AAATAATTTA CCTATTTTTG TTCATAATGA GAATTTTACC
TACATAGAAC CTTTTGTAGG GAGTGGTGCT GTGTTATTTT GGTTGCTCAG TGAGTTTCCT
AATATGAAAA AAGCAGTTAT CAATGATATT AACAAAGAAT TGATAGATAC TTATAGAGCC
ATTGCTGAAA ATCCTGAACA GCTAATTGCT ATTCTTAATA GTCTGCAAAT AGAATATCAC
GCTTTGGAAG AGCAACAAGA GGCTAAAAAG GCATACTATT ACCAAAAAAG AGCTTTATTC
AATAGCAAAT GTGAAGAAAA GGTAATGCAA TCAGCTCTAT TTATATTCTT AAATCGCACT
TGTTTTAATG GTCTGTATCG AGTAAACAGT AAAAATGAGT TTAATGTACC TATAGGTAGC
TACAAGCGTC CTATGATTTG TGATAAAGAG AATATTTTAG CAGTAAGCAA GGCTTTGCAA
AAGGTAGAAA TTATTTGTGG AGACTTTGAG CAAACTATTC ATTATACCAA AGAAAATACT
TTATTTTATT TCGACCCTCC CTATAAACCT TTGAGTGAAA CCTCAAACTT CAATGCGTAT
GCAAAGGACA GTTTTGACGA TAGCGAACAA ATTCGTTTAA GAGACTTTTG TTATAAACTC
AATAACTTGA ATCACTATTG GATACTAAGC AATTCAGATG TAAAAGGAAA AGACGAAAAC
AATCATTTCT TTGATGAACT ATATGCTAAC TTTGAAATAA AACGCGTATT AGCCAAAAGA
AGTATCAATG CTAACCCTAA AAAACGAGGG ATACTAAATG AATTATTAAT TAACAACTAT
ACTAATAATT TTTTGACTAT ATGA
 
Protein sequence
MRKNTNHIAK PFLKWAGGKT QLIEQIKNNL PIFVHNENFT YIEPFVGSGA VLFWLLSEFP 
NMKKAVINDI NKELIDTYRA IAENPEQLIA ILNSLQIEYH ALEEQQEAKK AYYYQKRALF
NSKCEEKVMQ SALFIFLNRT CFNGLYRVNS KNEFNVPIGS YKRPMICDKE NILAVSKALQ
KVEIICGDFE QTIHYTKENT LFYFDPPYKP LSETSNFNAY AKDSFDDSEQ IRLRDFCYKL
NNLNHYWILS NSDVKGKDEN NHFFDELYAN FEIKRVLAKR SINANPKKRG ILNELLINNY
TNNFLTI