| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2136 |
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| Symbol | |
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| ID | 8368597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2554920 |
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| End bp | 2556116 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984590 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003142241 |
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| Protein GI | 256820962 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.509779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAA ACGATTTACT AAACATAGCA AATACTTACG GTAGCCCTGT ATATGTATAT
GATGCCCAGA AGATTGCTTC TCAATATAAC CGACTTACCA ATGCCTTTGC CTCAGTACCC
AAGTTGCGCA TCAACTATGC AATGAAAGCC CTTTCTAATA TTTCTATCTT GAAATTGATG
AAGGACTTGG GGGCTGGTCT CGATACCGTT TCTATTCAGG AAGTACAGTT GGGATTGCTG
GCAGGTTTTG ACCCTCAGCA AATTATTTTT ACGCCTAATG GTGTCTCAAT GGACGAAATT
GAGGAGGCTA TGCGCTTAGG AGTACAGCTC AACATCGATA ATCTTTCGTT CTTGGAGCAG
TTTGGCACAC AACACCCTGA GATACCCGTG TGTATTCGTA TCAATCCACA CGTGATGGCA
GGCGGTAATA GCAATATTTC GGTAGGGCAT ATCGATAGTA AGTTTGGTAT TAGCATTCAT
CAAATACCGC ATATCTTGCG CATCGTCGAG AATACAAAGA TGCACATCAA CGGTATCCAT
ATGCACACAG GTAGTGATAT TTTAGATATT GATGTGTTCC TATACGCTGC CGAAATACTC
TTTGAAACCG CTAAACACTT TAAGGATTTA CAATTTATCG ACTTTGGCAG TGGCTTTAAA
GTGCCTTATA AAGAGGGAGA TATACAAACC AATATAGAAG AGTTGGGCGA ACGTCTCAGC
AGTCGCTTTG CTGATTTCTG CAAGGAGTAC GGTCGCAACC TTACATTAGC TTTCGAACCT
GGTAAGTTTT TAGTAAGTGA AGCAGGCTAC TTTTTAGTAA AGGTGAATGT AGTAAAGCAA
ACCACTTCTA CGGTATTTGC AGGCATCGAC TCTGGTTTCA ATCATCTTAT CCGACCAATG
TTCTACGGGG CTAATCATTA TATCGAAAAC ATTTCTAACC CCGAAGGTAA GAATCGTTTC
TATTCAGTAG TCGGGTATAT ATGCGAGACC GATACCTTTG CCTCCAACCG ACAAATAGCT
GAGATTACTG AGGGCGATAT ATTGTGCTTT CACAATGCAG GTGCCTATTG CTACACTATG
GCGAGCAACT ACAATTCACG CTTGCGTCCA GCAGAAGTAT TGTGGCAGAA TGGGGAAGCT
AAACTTATCA GAAAGGCAGA AACCTTCGAA GACTTACTAA GAGGACAGAT ATATTAA
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| Protein sequence | MKINDLLNIA NTYGSPVYVY DAQKIASQYN RLTNAFASVP KLRINYAMKA LSNISILKLM
KDLGAGLDTV SIQEVQLGLL AGFDPQQIIF TPNGVSMDEI EEAMRLGVQL NIDNLSFLEQ
FGTQHPEIPV CIRINPHVMA GGNSNISVGH IDSKFGISIH QIPHILRIVE NTKMHINGIH
MHTGSDILDI DVFLYAAEIL FETAKHFKDL QFIDFGSGFK VPYKEGDIQT NIEELGERLS
SRFADFCKEY GRNLTLAFEP GKFLVSEAGY FLVKVNVVKQ TTSTVFAGID SGFNHLIRPM
FYGANHYIEN ISNPEGKNRF YSVVGYICET DTFASNRQIA EITEGDILCF HNAGAYCYTM
ASNYNSRLRP AEVLWQNGEA KLIRKAETFE DLLRGQIY
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