Gene Coch_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2132 
Symbol 
ID8368593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2551801 
End bp2552985 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content44% 
IMG OID644984586 
ProductCellulase 
Protein accessionYP_003142237 
Protein GI256820958 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGA ATAAATTACT ATCCTTAGTA GCTTTTTTAT GGGTAATGAC CGCCTGTGAA 
AAATCAGGGG AAGAGAGCGA CCCCTCTACA CAGACTCCAA CAACGCAAAC CTCTACTACA
CAAACTCCTA CTACTCAGAC CCCTACTACA CCTCCTATTA CGCCTCCGGT TACTCCTCCT
ATTCCACCTA ACCCACCACA AGGTAAAAAG CCGGTAGCTT ATGACTGGGA TTTTTACTTG
GAGCCCTCTC GGTTAGACGT AGTAAAAAAT GAAAAAAATG CCGAGTTGAA AAAGCTGTAT
TACCAAGTGT ATGGTACGCC CTGCGGAGGT TGGTATGACG GCGGTGTTAG TCCTGGTAGT
GGTGGTAAAG AGAAAAATGA CCGTTGGCTT AAAAACTTCG TTGAGGGAGC AGAACGCGCT
CGCAAAACGC CTATTGTGGT GCTTTACGGT ATTCCCAATC GCGATTGTGG GTCGTTTTCA
AAAGGAGGGC ACCCTAATGC TGCTTCTTAC AAAGAGTGGA TAGACCGTGT AAGTGCCATT
ATTGGACAAC GCCGTGCGGT GGTTATTATT GAACCTGATG CCATTAACTA CTGCGGTCAC
CCAAGAGGCT CAGCTAAATA CAATGAGCGT GCTGAACTGC TTAATTATGC CGCTGAAAAA
CTAAATAAGA ACAACCCTAA TGTAGTGAGC TATATTCACG CTGGGAATTC TGATTTGGTC
ACAAAACACC CTGAAGCTGT TGCCAATGCT ATTATAGATG GAGGTTTAAA ATATATGCGT
GGTTTCGCAC TGAATGTTTC GGGCTTAGGA GGCACTGCCG AAGAACAAGC CGGAGCCGAG
AGATTTGTAA CTTACTTAGC TTCTAAAGGT TTTAAAGATG TGCATTACGT GATTGACACA
GGGCGCAGTG GTATTAATAG ACCTAAACAC CAAAATGCAA ATGCTCCTTA TAACTCTTGC
AATAACTTTA ATGCAGCTTT AGGCCCGCGT AGCACTACCA AAACCACAGG TGCACACGCC
GATGCTTATT TGTGGATTAA CGGAGGAGGA GGCTCTGATG GTGAATGTAA TATGGGAGCC
CCCGCAGCGG GAAAGCCTTA TCCTGAATAT ACAAGACACT TGGTGCAAAA CGCTATGAGA
GTGAAAAGTA TAGAGATTTT GGAAGTACCT CAAAACTTAA AATAG
 
Protein sequence
MIMNKLLSLV AFLWVMTACE KSGEESDPST QTPTTQTSTT QTPTTQTPTT PPITPPVTPP 
IPPNPPQGKK PVAYDWDFYL EPSRLDVVKN EKNAELKKLY YQVYGTPCGG WYDGGVSPGS
GGKEKNDRWL KNFVEGAERA RKTPIVVLYG IPNRDCGSFS KGGHPNAASY KEWIDRVSAI
IGQRRAVVII EPDAINYCGH PRGSAKYNER AELLNYAAEK LNKNNPNVVS YIHAGNSDLV
TKHPEAVANA IIDGGLKYMR GFALNVSGLG GTAEEQAGAE RFVTYLASKG FKDVHYVIDT
GRSGINRPKH QNANAPYNSC NNFNAALGPR STTKTTGAHA DAYLWINGGG GSDGECNMGA
PAAGKPYPEY TRHLVQNAMR VKSIEILEVP QNLK