Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2132 |
Symbol | |
ID | 8368593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2551801 |
End bp | 2552985 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644984586 |
Product | Cellulase |
Protein accession | YP_003142237 |
Protein GI | 256820958 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATGA ATAAATTACT ATCCTTAGTA GCTTTTTTAT GGGTAATGAC CGCCTGTGAA AAATCAGGGG AAGAGAGCGA CCCCTCTACA CAGACTCCAA CAACGCAAAC CTCTACTACA CAAACTCCTA CTACTCAGAC CCCTACTACA CCTCCTATTA CGCCTCCGGT TACTCCTCCT ATTCCACCTA ACCCACCACA AGGTAAAAAG CCGGTAGCTT ATGACTGGGA TTTTTACTTG GAGCCCTCTC GGTTAGACGT AGTAAAAAAT GAAAAAAATG CCGAGTTGAA AAAGCTGTAT TACCAAGTGT ATGGTACGCC CTGCGGAGGT TGGTATGACG GCGGTGTTAG TCCTGGTAGT GGTGGTAAAG AGAAAAATGA CCGTTGGCTT AAAAACTTCG TTGAGGGAGC AGAACGCGCT CGCAAAACGC CTATTGTGGT GCTTTACGGT ATTCCCAATC GCGATTGTGG GTCGTTTTCA AAAGGAGGGC ACCCTAATGC TGCTTCTTAC AAAGAGTGGA TAGACCGTGT AAGTGCCATT ATTGGACAAC GCCGTGCGGT GGTTATTATT GAACCTGATG CCATTAACTA CTGCGGTCAC CCAAGAGGCT CAGCTAAATA CAATGAGCGT GCTGAACTGC TTAATTATGC CGCTGAAAAA CTAAATAAGA ACAACCCTAA TGTAGTGAGC TATATTCACG CTGGGAATTC TGATTTGGTC ACAAAACACC CTGAAGCTGT TGCCAATGCT ATTATAGATG GAGGTTTAAA ATATATGCGT GGTTTCGCAC TGAATGTTTC GGGCTTAGGA GGCACTGCCG AAGAACAAGC CGGAGCCGAG AGATTTGTAA CTTACTTAGC TTCTAAAGGT TTTAAAGATG TGCATTACGT GATTGACACA GGGCGCAGTG GTATTAATAG ACCTAAACAC CAAAATGCAA ATGCTCCTTA TAACTCTTGC AATAACTTTA ATGCAGCTTT AGGCCCGCGT AGCACTACCA AAACCACAGG TGCACACGCC GATGCTTATT TGTGGATTAA CGGAGGAGGA GGCTCTGATG GTGAATGTAA TATGGGAGCC CCCGCAGCGG GAAAGCCTTA TCCTGAATAT ACAAGACACT TGGTGCAAAA CGCTATGAGA GTGAAAAGTA TAGAGATTTT GGAAGTACCT CAAAACTTAA AATAG
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Protein sequence | MIMNKLLSLV AFLWVMTACE KSGEESDPST QTPTTQTSTT QTPTTQTPTT PPITPPVTPP IPPNPPQGKK PVAYDWDFYL EPSRLDVVKN EKNAELKKLY YQVYGTPCGG WYDGGVSPGS GGKEKNDRWL KNFVEGAERA RKTPIVVLYG IPNRDCGSFS KGGHPNAASY KEWIDRVSAI IGQRRAVVII EPDAINYCGH PRGSAKYNER AELLNYAAEK LNKNNPNVVS YIHAGNSDLV TKHPEAVANA IIDGGLKYMR GFALNVSGLG GTAEEQAGAE RFVTYLASKG FKDVHYVIDT GRSGINRPKH QNANAPYNSC NNFNAALGPR STTKTTGAHA DAYLWINGGG GSDGECNMGA PAAGKPYPEY TRHLVQNAMR VKSIEILEVP QNLK
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