Gene Coch_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2066 
Symbol 
ID8368527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2477462 
End bp2478631 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content41% 
IMG OID644984520 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_003142171 
Protein GI256820892 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000010406 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA AACAATTAGA AAAACAATAT CGCGATGAAT TGTTACAAAA CGTGATTCCG 
TTTTGGTTAG AGAAATCGCA AGACAAAGAA TATGGTGGTT ATTTTACTTG TCTTGACCGC
CAAGGAAATG TATTTGATAC CGATAAGTTT ATTTGGTTAC AAGGGCGTGA AGTATGGTTC
TTTGCAATGC TTTATAACCG TGTAGAAAAA CGACAAGAAT GGTTGGATTG CGCTATACAA
GGAGCAGAGT TCCTCAAAAA ATACGGACAC GACGGAAACC TAAACTGGTA TTTTTCATTA
GACCGACAAG GTAACCCTCT TGTGGAACCA TATAATATTT TCTCTTATAC CTTTGCTACG
ATGGCTTTCG GTCAGTTGAG CATTGCCACA GGCAATCAGG AATATGCCGA TATAGCCAAA
CGCACTTTTG ATATTATCCT TTCTAAACAA GATAATCCTA AGGGGAAATG GAGCAAAGCC
TACCCAGGCA CTCGTTCGCT TAAAAACTTT GCCTTGCCTA TGATTCTCTG TAATTTGGCA
TTGGAGATAG AACCCTTATT GGACGAGGCT TTCATCGAGA AAACGATGGA TACTTGTATT
CACGAAGTAA TGGACGTATT TTTACGCCCT GAACTGGGTG GCATCGTAGT AGAAAATGTA
AATGCTGATG GTTCGCTATC TGATACTTTT GAAGGTCGTC AGCTTACCCC CGGTCACGCC
ATTGAGGCAA TGTGGTTTAT AATGGACTTA GGCAAACGTC TCAATCGTCC TGAGCTTATC
GAAAAGGCGG TGCAAACTAC CCTAAAAATG ATTGACTACG GTTGGGATAA ACAGTATGGC
GGTATCTACT ACTTTATGGA TAGAAAAGGC TGTCCGCCCC AACAATTAGA ATGGGATCAG
AAACTGTGGT GGGTACATAT AGAAACGCTT ATTTCGCTGA TAAAAGGATA TCAACTCACT
GGTAATAAAG AGTGCTTGCA GTGGTTTGAG AAAGTGCATC ATTACACTTG GGAACATTTT
AAAGACCCTA AACACCGCGA ATGGTGGGGG TACCTCAATC GCCAAGGCGA AGTGCTTTTA
GACCTCAAAG GCGGTAAATG GAAAGGCTGT TTCCACGTAC CACGTGGCTT ATATCAAGTG
TGGAAAACAA TTGCAATGAT TAATGGTTAA
 
Protein sequence
MDFKQLEKQY RDELLQNVIP FWLEKSQDKE YGGYFTCLDR QGNVFDTDKF IWLQGREVWF 
FAMLYNRVEK RQEWLDCAIQ GAEFLKKYGH DGNLNWYFSL DRQGNPLVEP YNIFSYTFAT
MAFGQLSIAT GNQEYADIAK RTFDIILSKQ DNPKGKWSKA YPGTRSLKNF ALPMILCNLA
LEIEPLLDEA FIEKTMDTCI HEVMDVFLRP ELGGIVVENV NADGSLSDTF EGRQLTPGHA
IEAMWFIMDL GKRLNRPELI EKAVQTTLKM IDYGWDKQYG GIYYFMDRKG CPPQQLEWDQ
KLWWVHIETL ISLIKGYQLT GNKECLQWFE KVHHYTWEHF KDPKHREWWG YLNRQGEVLL
DLKGGKWKGC FHVPRGLYQV WKTIAMING