| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2065 |
|---|
| Symbol | |
|---|
| ID | 8368526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2476199 |
|---|
| End bp | 2477455 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644984519 |
|---|
| Product | Kelch repeat-containing protein |
|---|
| Protein accession | YP_003142170 |
|---|
| Protein GI | 256820891 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03548] cyclically-permuted mutatrotase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000118858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATG ATAAAAAACA AATAATGAAC AGAAAAACTT TGACAAAGTC TAAGCTACTT
TGCCAAAGTT TCCTGCCCGT GCGGCTCGCA CCTTTGGCAA AGTCTGCTCT ATTCGTTTTA
TCTCTGACGG CTTGTACAGA AACCCAAAAA GAACAACCTA TGAAAATTAA TATTACAACA
CTTACCACCC AAGGCTTGGA AGGCGATTTG CAGAAAGGCG TTTCGGCTTC TTATGCTGCC
CTGCTCAATG GTGAATTATT GGTAGCAGGA GGGTGTAACT TCCCTGATAA ATTGGGTTTT
GAAGGCGGAA AGAAAGTGTT TTACGATGAA ATACTTCACT TCAATAAAAC ACAAAACGAA
TGGCAAACAG TGGGCAAGCT TCCTGAGGCA GCAGCTTATG GGGTATCGGT AGCGATTCCT
GCTGGCTATC TGTGGATAGG AGGACAAACG GCTACACACT CTTTAGCTAA TTGCTATAAG
GTGCAGTATT CAAAAGAAAA AGGCATTACA CTTACTTCTT TTCCTTCTTT GCCTGAACCA
CTCGACAACT TTGCAGGAGC GAGCATAGGT AGCAAGGTGT TTGTAGCAGG AGGTAGTGCT
TCGGGAAAGC CCTCTAACAA ACTGTATTAT ATCGATACTG CTACTGATAA AGAGTGGCAT
CGCTTGCCTG ATTTCCCCGA AGAGCCCAGT GTACAACCTG TATTAGTAGC GATGGAACAA
GAGGGTGATA CACACTTATT CTTGTTAGGA GGCTTTTTCG GAGGGGATAC TACCCGCGTG
CCTGCCCTCT CTACTGCTGT GTGGAGGTAT AGTGTGCAAC AACAGCAATG GCAAAAAGTA
GCTACACAAG GAAGTCCTGA TAAAGTGCCA TTTTCGCTCA CAGGAGCTAC AGCTTTGGCT
ATTGATAACC GCTATATTGC TTGTTTTGGA GGTGTAAATG CAACACTTTT CTTAAAAACC
ATCACCGACC TCTATGACAT AGGTCGAGAT ACTACCCTCA CTGATGAGAC ACGCAAGCAG
AAAAACTACG ACTATATGTT GCATTATATG ACACAGCCTA TTGAGTACTA TCGTTTCAAT
AAAGAGTGTT ATCTGTTCGA TACTCACACG CAAGAGTGGT CGGTGCTCGA TACACAAACT
GATTTTGCTC GAGCAGGTGC TACCTTAGTA GGTTCTCCAG ATGAGTTTTA CCTCGTGCAA
GGAGAACTAA AACCCGGTGT ACGTAGTAAT AAAACTTTTA AAGTTGTGGT AAAATAG
|
|---|
| Protein sequence | MVNDKKQIMN RKTLTKSKLL CQSFLPVRLA PLAKSALFVL SLTACTETQK EQPMKINITT
LTTQGLEGDL QKGVSASYAA LLNGELLVAG GCNFPDKLGF EGGKKVFYDE ILHFNKTQNE
WQTVGKLPEA AAYGVSVAIP AGYLWIGGQT ATHSLANCYK VQYSKEKGIT LTSFPSLPEP
LDNFAGASIG SKVFVAGGSA SGKPSNKLYY IDTATDKEWH RLPDFPEEPS VQPVLVAMEQ
EGDTHLFLLG GFFGGDTTRV PALSTAVWRY SVQQQQWQKV ATQGSPDKVP FSLTGATALA
IDNRYIACFG GVNATLFLKT ITDLYDIGRD TTLTDETRKQ KNYDYMLHYM TQPIEYYRFN
KECYLFDTHT QEWSVLDTQT DFARAGATLV GSPDEFYLVQ GELKPGVRSN KTFKVVVK
|
|---|
| |