Gene Coch_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2046 
Symbol 
ID8368507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2450231 
End bp2451136 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content38% 
IMG OID644984500 
Productprotein of unknown function DUF161 
Protein accessionYP_003142151 
Protein GI256820872 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.302347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAG CAGATAGCAA GACTATTAAA TACTTAAAGT CTTTTTACAT AAAGGATTAT 
CTTATTATCA TCTTAGGGCT TATATCATAT GCGATAGGAA TTACAGGCTT TATAATGCCT
AATGGGATAG TAACGGGAGG TTTGGCAGGT ATCTGTCTTA TCCTAAATTA TAAGTTAGGA
GCCGACTTGG CTATTACCTA TTGGATTATC AACTTTATAC TTTTGGTGAT AGGCTTTAAA
GCAATGAGTA AGCAATTCAC CTACCGAACA CTCATCTCTA TAACTATTCT ATCGGGATTA
ATTTGGGCTG GGAAAGAGTA TTTAATGCCT TATTTTATAG AACACCCTCC TTTGAGAGAC
GACTTCTTAA ATGTAATTAT GGGAGGATTG CTATGCGGTA CGGGTTTAGG ATTGGTTTAT
TCAGCTAACG GAAGTACAGG AGGCACTGAT ATAATAGGCT TTGTTATTAC CAAGTATTAT
AGCATCAGTA TAGCGCGTAT TCTTTTGGTG GTAGACGTGT GTATCGTGCT ATCGTCTTTC
TTCATTTTGG AACGCCAAGA CAATTCACTT GAAAAGACTA TTTATGGACT TATCCTCTTA
CCTCTGATGT GGCAGATGGT AGAAATTGTT ATCAATGGAG CAAGACAGTC GGTGCAGTTG
TTTATCTTCT CTAAACACTA TGATGAGATA GCGAACCACA TCAATAGTGA ACTCAAACGC
GGTTGTACCA TTATCGATGG GATAGGTTGG TATTCTAAAT CCTCACAAAA AATAGTGATT
GTAATAGCTC GCCGCACAGA GGCTACTTCT ATCTTCCGTT TGGTGCGAAC AATAGATCCA
GCTGCCTTTG TAACGAAGAC TAACGTAATG GGGGTTTATG GTAATGGTTT TGATAAATTA
AAGTAA
 
Protein sequence
MAIADSKTIK YLKSFYIKDY LIIILGLISY AIGITGFIMP NGIVTGGLAG ICLILNYKLG 
ADLAITYWII NFILLVIGFK AMSKQFTYRT LISITILSGL IWAGKEYLMP YFIEHPPLRD
DFLNVIMGGL LCGTGLGLVY SANGSTGGTD IIGFVITKYY SISIARILLV VDVCIVLSSF
FILERQDNSL EKTIYGLILL PLMWQMVEIV INGARQSVQL FIFSKHYDEI ANHINSELKR
GCTIIDGIGW YSKSSQKIVI VIARRTEATS IFRLVRTIDP AAFVTKTNVM GVYGNGFDKL
K