| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2037 |
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| Symbol | |
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| ID | 8368498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2439856 |
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| End bp | 2441529 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984491 |
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| Product | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_003142142 |
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| Protein GI | 256820863 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC CTCAAATAAA ATTAGCACAA TACGTAATAG AAGCCTGTAA AGCCAAACAA
TTAAAGCACA TTGTTATTTC ACCAGGGTCG CGCAATGCCC CTCTGACTAT TGGCTTTGCC
AACGATCCTT ATTTTAGTTG TTACAGCATC GTAGATGAAC GTTGTGCTGC TTTTTTTGCC
CTGGGTATTG CTCAGCAAAT ACAGCAACCT GTGGCAGTGG TGTGTACATC GGGCTCTGCC
TTGCTGAATT ACTATCCTGC TTTTTCAGAG GCTTTTTACA GTAATATACC ATTAGTGGTC
ATCTCAGCCG ACCGTCCGTC GAGCAAAATA GACATAGGTG ACGGGCAAAC CATACGTCAG
GTGAATGTAC TGGCAAACCA CAGTGCCTAT AATGCCAATC TATCCGATGA AGCACATAGT
GATAAAAGCA ATTTTTACGA GCTAAACAGG GCACTGAATA CAGCTATAGA GGAGCAATTG
CCGGTGCACA TCAATGTACC TTTTGAAGAA CCCTTATACC TTACTACGGA AGAGCACTAT
TCTTTTAAGA ATATAGCTGC AAAACCACAG AAACCTATTA TTAATGAGAG AAAATCCACT
GATTTCGTAA AACATTGGAA CGATTCAGCT AAAAAAATGG TATTAGTAGG AGTGTTGGCT
CCTAATAGTG TAGAAGCACA ATATGTAGAA TGGCTTGCTA AAGACCCCTC GGTATTGGTA
CTGACAGAAA CTACATCTAA CTTGCACCAC TCCGATTTTA TTCCTTATAT AGATAAATTA
CTCACTTATA CTGAAAGAGA CCCAGTTCTA AAAGAAGCCT TACGACCTGA TTTATTACTT
ACTTTTGGAG GCTTGGTAGT TTCCAAAAAG ATAAAACAGT TCTTACGTAG TTATAAACCT
ACTTATCACT ATAATGTAGA TTTGTACAAA GGTTATGATT CGTATTTCTG TTTAACAGCT
CATTTTAAAG CGGATATCAA TACTTTTTTG AGGGAGGTAA TCCCTAATTT GGTTAATGTT
TCTTCTACTT ATCAACAGCA GTGGTTAGAG GTGAAAAACG AGATACAGCA AATACATTTA
GAGTATATCA GCCAAATACC TTTTTCCGAT TTTAAAGTGT ACAGTGAGGT ATTCAGTAAT
ATTCCTAATG ATTATATTAT ACAGATAAGC AATAGTTCTG CAATTAGGTA TGCTCAACTG
ATAAAAGCAC ACCCTTCTTG GAAGGTGTTT TGCAACCGAG GTACTAGTGG TATCGACGGT
AGTATGAGCA CTGCTATTGG GGCTGCTGTA GGAAGCGCAT CGCCCACAGT GTTCATTACA
GGTGATTTGA GTTTCTTTTA CGACAGCAAT GCTCTTTGGA ACAAATATAT TCCACAAGAC
TTTAGAGTGA TTCTCCTCAA TAATCAAGGT GGAGGCATTT TCAGAATACT ACCCGGTGAT
AAAGCTGACC CTAACTTTGA ATACTTCTTT GAGACGCCTC ATAGGCTTAC CGCAGAACAT
TTTTGTAAAA TGTATGGCAT TAGCTATCAG TTAGCAACTA ATCTATCTGA TTTACAGAAA
GATTTAAGCA ATTTCTTCGA AGTATCAGAG AGACCTAAGC TGTTAGAAAT CCATACACCA
AGAAAAATAA ATGATAAAGT TTTGTTAAAA TATTTTGAGG TATTGAAAAA ATGA
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| Protein sequence | MKRPQIKLAQ YVIEACKAKQ LKHIVISPGS RNAPLTIGFA NDPYFSCYSI VDERCAAFFA
LGIAQQIQQP VAVVCTSGSA LLNYYPAFSE AFYSNIPLVV ISADRPSSKI DIGDGQTIRQ
VNVLANHSAY NANLSDEAHS DKSNFYELNR ALNTAIEEQL PVHINVPFEE PLYLTTEEHY
SFKNIAAKPQ KPIINERKST DFVKHWNDSA KKMVLVGVLA PNSVEAQYVE WLAKDPSVLV
LTETTSNLHH SDFIPYIDKL LTYTERDPVL KEALRPDLLL TFGGLVVSKK IKQFLRSYKP
TYHYNVDLYK GYDSYFCLTA HFKADINTFL REVIPNLVNV SSTYQQQWLE VKNEIQQIHL
EYISQIPFSD FKVYSEVFSN IPNDYIIQIS NSSAIRYAQL IKAHPSWKVF CNRGTSGIDG
SMSTAIGAAV GSASPTVFIT GDLSFFYDSN ALWNKYIPQD FRVILLNNQG GGIFRILPGD
KADPNFEYFF ETPHRLTAEH FCKMYGISYQ LATNLSDLQK DLSNFFEVSE RPKLLEIHTP
RKINDKVLLK YFEVLKK
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