Gene Coch_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2005 
Symbol 
ID8368466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp2396580 
End bp2397194 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content34% 
IMG OID644984459 
Producturidine kinase 
Protein accessionYP_003142110 
Protein GI256820831 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.679011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATCA TAGGAATTAC AGGAGGAACA GGTTGTGGTA AAACAACTGT TGTCAATCAA 
ATTATTAAAG AACTCTCAGG CGAGGAAGTT ACCGTTATTT CACAAGATTC TTACTATAAA 
GATTTGAGTT ATCTTAGCTT TTCTGACCGC ACCAAAATCA ATTTCGACCA TCCCAACTCT 
ATCGATTTTG ATTTGCTTAA AGAACATTTA TTAGCATTAA GAGAAGGAAA AGATATTCAA 
AGTCCTACTT ATTCATTCGT AGAACACAAC CGTACTAACG AAACCATTTT AGTTAAACCT 
ACCAAAGTAG TAATTGTAGA AGGTATTCTT ATCTTTGCAC ACCCCGATAT CCGTGAGCTT 
TTTGATATTA AAATATTTGT ACACGCCGAT TCTGATGAAC GACTTATACG TCGTATCAAA 
CGCGATACAA CCGAGAGAGG TCGTGATGTG AATGAAGTAC TCAATCGCTA TCAAACCACC 
TTAAAACCTA TGCATTTAGA GTTTATTGAA CCTGCTAAAG AATTCGCCGA TATCATTATT 
CCTAATAATA AGCGCAATAA AGTAGCTATT GATATCATTA AAACAATAGT GCATAACCGT 
ATATTTCAAA AATAA
 
Protein sequence
MLIIGITGGT GCGKTTVVNQ IIKELSGEEV TVISQDSYYK DLSYLSFSDR TKINFDHPNS 
IDFDLLKEHL LALREGKDIQ SPTYSFVEHN RTNETILVKP TKVVIVEGIL IFAHPDIREL 
FDIKIFVHAD SDERLIRRIK RDTTERGRDV NEVLNRYQTT LKPMHLEFIE PAKEFADIII 
PNNKRNKVAI DIIKTIVHNR IFQK