| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1995 |
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| Symbol | |
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| ID | 8368456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2387600 |
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| End bp | 2389099 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984449 |
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| Product | All-trans-retinol 13,14-reductase |
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| Protein accession | YP_003142100 |
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| Protein GI | 256820821 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAT ACGATGTTTT GGTGATAGGT AGCGGACTTT CGGGGCTCTT TTCGGCTTTG
CTCTTGGCAA AAGCAGGAAA GAAAGTGTGT ATATTGGAGA AAAATGAGCA GTATGGAGGT
AATTTACAAA CTTTTGTGCG CAATAATACG CTGTTTGATA CAGGAGTGCA TTACATAGGA
AGTTTTGCTG AAGGTCAGGT GTTATACGAA TATTTTAAAG ATGTAGGTAT AGCCAATCAT
CTTTCGGTAG AACGCCTTGA TACAAACGGC TACGACCGTA TTTGTTTTGG TGATACACCT
AACGTGATGT ATCCTCACGC TCAGGGCTAT GAGAACTTCG TACAACAACT CCTCACCTAC
TTCCCCAATG AAAAAAAAGC CTTAGAAGAG TATGCTCACA CAATGCAATC TATTTGCGAT
AAGTTTCCAC TCTACCGCCA TAAACAAGCA GTAGCCGATT ACGATGTGCA TACACTTTCC
TTAAAACTCT TAGACTTTCT CAACGGTATC ACAACTAATG ACCGACTCAA AGCAGTGCTC
TTAGGCTCTA ACTTTCTCTA TGGAGGTGCT GATGAGCAGA CACCTTTATA CGTGCACGCG
CTATCGGTTA ATTCATATAT AGAAAGCGCT TGGCGACTCA CACAAGGGGG TAGCCAAATC
ACCAACTTGC TCATTGAAAA ATTGCGCCAA TACGGTGCTG ACCTTTTCAA CCAAAGGGAG
GTCATAGGCT TTGAATACAG TGAGGGGAAT ACTATCAACA CAGTACTCAC CAAGCAAGGA
GAGCAGTTTG TTGCAAAACA AATCATCTCG GCTATAGATG TAAAGCAACT ACTCAACATC
ACAGGCAAAA AGCCTTTTAA GCCTTCTTTT TGCAAACGCG TGCAGGGCTT ACAACCTACG
GTTGCTGCCT TTTCATTGCA TTTGGTACTC AAGCCAAATT CTTTTCGCTA CTTGCCCTAT
AATGTGTATT GGTTTAAGGA TAATAACAGC GTTTACCACG CTACTAATTA CCCTACTAAC
AACTTCCCGA TTTCGTATAT GCTCTCTATG AATCCACCCA AGGACGGCGG AGAGTATACT
GATAATGTTA CTATCCTCAC CTATATGAAC ACTGATGAAC TGCAACGCTG GCAAAATAGT
TTTACTACCA ACACCGAGGG TAATCATAGA GGCAACCAGT ATGAAGTTTT CAAAAGTCAA
CGTGCTATGG ATTTATTAGA TGTAGTTGCT CAACAATTTC CTACACTCAA AAGTGCTATT
GCTCATTACT ACACCTCTAC CCCACTCACT TACCGCGATT ATATAGGCAA CCCTACGGGA
GCATTGTACG GCTACAAAAA AAACGCTAAC CATATAATGG AAAGCGTTTT TATGCCACAA
ACTCACATCA AAAATTTGTA TGTTACAGGG CAGAGTGTTG CAATGCACGG ATTAGTAGGA
GTTACTATTA GTGCGGTGCT CACCTACCAA ATTTTGATGC GGTCTTCAGG TTTTTTATAG
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| Protein sequence | MKQYDVLVIG SGLSGLFSAL LLAKAGKKVC ILEKNEQYGG NLQTFVRNNT LFDTGVHYIG
SFAEGQVLYE YFKDVGIANH LSVERLDTNG YDRICFGDTP NVMYPHAQGY ENFVQQLLTY
FPNEKKALEE YAHTMQSICD KFPLYRHKQA VADYDVHTLS LKLLDFLNGI TTNDRLKAVL
LGSNFLYGGA DEQTPLYVHA LSVNSYIESA WRLTQGGSQI TNLLIEKLRQ YGADLFNQRE
VIGFEYSEGN TINTVLTKQG EQFVAKQIIS AIDVKQLLNI TGKKPFKPSF CKRVQGLQPT
VAAFSLHLVL KPNSFRYLPY NVYWFKDNNS VYHATNYPTN NFPISYMLSM NPPKDGGEYT
DNVTILTYMN TDELQRWQNS FTTNTEGNHR GNQYEVFKSQ RAMDLLDVVA QQFPTLKSAI
AHYYTSTPLT YRDYIGNPTG ALYGYKKNAN HIMESVFMPQ THIKNLYVTG QSVAMHGLVG
VTISAVLTYQ ILMRSSGFL
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