Gene Coch_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1965 
Symbol 
ID8368423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2359716 
End bp2360024 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content32% 
IMG OID644984416 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_003142070 
Protein GI256820791 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.462066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAT TGATGAACAG TGGTTTACTA CCTCTTATAT TGATAATCTT AGTATTCTAC 
TTTTTTATGA TTCGTCCGCA AGTAAGACGA CAAAAACAAG AAAAAAACTT TATTGAAGGA
ATGAAAAGAG GGGATAAAGT AATTACTAAA AGTGGTATGC ACGGACGCAT TGTAGAACTT
ACTGATGATA CTTGTGTCTT AGAAACACTT TCAGGAAAAA TCAAATTTGA ACGTTCTGCT
ATTTCTATGG AACTGTCAGC TAAATTAAAA GACGACAAGA AAGAAATTCA AGACAAGAAA
GAATCGTAA
 
Protein sequence
MQQLMNSGLL PLILIILVFY FFMIRPQVRR QKQEKNFIEG MKRGDKVITK SGMHGRIVEL 
TDDTCVLETL SGKIKFERSA ISMELSAKLK DDKKEIQDKK ES