Gene Coch_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1950 
Symbolmpi 
ID8368408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2342829 
End bp2343437 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content40% 
IMG OID644984401 
Productmultiple promoter invertase 
Protein accessionYP_003142055 
Protein GI256820776 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.202011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATG GATATATTCG GGTAAGTTCC GATAAACAAA CTGTAGAAAA CCAGCGTTTT 
GAAATTACTA ATTTCTGTGA GAAAAACAGC CTAACTATTG ATGTTTGGGT AGAAGAAACT 
ATTTCAGGTA TGACAAGAGT AGAGAATAGA AAACTCGGTA AACTCCTAAA AAAAATGAAA 
AAAGGCGATG TGCTTATTTG TTCGGAGCTT TCGCGGTTGG GGCGTAACCT CTTGATGATT 
ATGGGGGTGC TCAATGAGTG TATGAACCGC GATATTCAGG TGTGGACAAT TAAAGATAAT 
TATCGCTTGG GGAGCGATAT TAATAGCAAA GTATTAGCAT TTGCCTTTGG GCTATCTGCT 
GAGATTGAAC GTAACCTTAT CAGTCAACGT ACCAAAGAGG CATTGGCACG CAAGAAAGCA 
GAGGGAGTAG TTCTCGGTCG CCCTAAAGGT AGTAAGTCCG CTAAAACAAA ACTCACCGGA 
CAGGAAAAAA AGATTAAAGA GTTGCTAGAT AAGCGAGTAT CATATTCAGC TATTGGGCGC 
ATTTTGGGGG TACATAGACT AACAGTGAGT AGTTTTGTGA AAGAACGTTT ACCCTTAATT 
TCGCATTAG
 
Protein sequence
MIYGYIRVSS DKQTVENQRF EITNFCEKNS LTIDVWVEET ISGMTRVENR KLGKLLKKMK 
KGDVLICSEL SRLGRNLLMI MGVLNECMNR DIQVWTIKDN YRLGSDINSK VLAFAFGLSA 
EIERNLISQR TKEALARKKA EGVVLGRPKG SKSAKTKLTG QEKKIKELLD KRVSYSAIGR 
ILGVHRLTVS SFVKERLPLI SH