| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1864 |
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| Symbol | |
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| ID | 8368317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2236911 |
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| End bp | 2237747 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984311 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_003141970 |
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| Protein GI | 256820691 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00318997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA TATTCAACTC AAGAGTATTA AAAAAACTGA ACAAACTTTG CTTTAAAGCT
TGGTTTGTTT GCTTGCTATT TTTCTTTGCT ATGAGTCATG CTCAACGGGA AGACTTTAAG
ACTTTGGTAG AGAAAGCCAC AAAGGGCGAT ATGGAAGCTC AGGTGCGTTT GGCAACTAAT
TATGAAAAAG GTATTGGAGT ACCTCAGTCC TTTCCTAAAG CTGTTTCTTG GTATGAAAAA
GCAGCAGAAC AAGGTGATGT AAAATCACAG ACGAAATTAG GACTTTGTTA TTACTATCGG
AAAGGAGTTG TACAGTCTTA TGAAAAAGCA GCTTATTGGT TTCAGAAAGC AGCTGAACAG
GGGTATGCTG AGGCTCAATC GAAATTAGGT GTGTGCTATC ACAAAGGGCA AGGAGTAAAA
CAATCGGATG AACAAGCTGT ATTGTGGTTT CAGAAAGCAG CTGATCAAGA TTTTGCAGAG
GCACAGAGTT TTTTAGGATA TTGTTACTAT AAAGGTTTAG GAGTGGCACA ATCGGATAGT
GATGCGGTAT TTTGGTATGA GAAAGCTGCT AATCAAGGTG ATGTTGAGGC ACAACGCAAT
TTAGGCTCTT ATTATTTCAA GGGGCAGGGA ATACCTCAGT CGTATACTAA AGCTATCTTT
TGGTTTGAAA AAGCAGCCAA CCAAGGAGAC AAGGAAGCTC AAACTATTTT AGGATTTTGC
TATTATGCCG GTACTGGTGT GGATAAATCA CAAAAAAGGG CTATTTACTG GTTTGAGAAG
GGGTGTAGGA ATAATAGTCC TAAAGCTTGT GAGTATTTAA ATGCTATTCA GCAGTAA
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| Protein sequence | MNIIFNSRVL KKLNKLCFKA WFVCLLFFFA MSHAQREDFK TLVEKATKGD MEAQVRLATN
YEKGIGVPQS FPKAVSWYEK AAEQGDVKSQ TKLGLCYYYR KGVVQSYEKA AYWFQKAAEQ
GYAEAQSKLG VCYHKGQGVK QSDEQAVLWF QKAADQDFAE AQSFLGYCYY KGLGVAQSDS
DAVFWYEKAA NQGDVEAQRN LGSYYFKGQG IPQSYTKAIF WFEKAANQGD KEAQTILGFC
YYAGTGVDKS QKRAIYWFEK GCRNNSPKAC EYLNAIQQ
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