Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1838 |
Symbol | |
ID | 8368286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2197583 |
End bp | 2198803 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644984280 |
Product | cysteine desulfurase, SufS subfamily |
Protein accession | YP_003141944 |
Protein GI | 256820665 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0112034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTA TTCTTGAAAT AAGAACAGAC TTCCCTATAC TCTCACGCAC TATTCATAAC AAACCTCTTA TCTATTTTGA TAATGGAGCA ACTTCGCAAA CACCTACACA AGTGATAGAG GCAATAGTGC ATTATTACAG TTACCAAAAT GCTAATATAC ACCGTGGAGT ACACACTCTC AGCCAAGAAG CTACTGATGC TTATGAAGAA GCGAGGAAGA AACTACAGCG CCACTTCAAT GCCCGTAAAA GCTCTGAAAT TCTTTTTACT GCGGGAACTA CACACGGTAT TAATTTAGTG GCTAACGGTT ATAGCGCACT GATGCAAGAG AGAGACGAAG TAATTATTTC GGCTTCAGAA CACCACAGCA ATATAGTGCC TTGGCAATTA GCTTGCCAAC GGAGTGGAGC TACCTTAAAA GTAATCCCGA TGAATGAGAA AGGAATTTTG GACTTAGAGG TGTATAACCA ACTGCTAAAT AAACGTACGA AGATAGTGTG TGTACAGCAC GTATCGAACG CCTTAGGAAA TATTCACCCT ATAGAAGAAA TTATAGAAAA AGCACACCGT GTAGGAGCTG TTGTATTAGT AGATGGAGCA CAAGCAGCCC CACATTTGCA ACCCGATATG CAAACTCTCG ATGTTGATTT CTATGCTGTT TCAGCTCATA AAATGTACGG ACCTACGGGG ATAGGAGCGT TGTATGGTAA AGAAGAATTA CTATTACAAT TACCTCCTTA TCAAGGAGGG GGAGAAATGA TAAAAGAAGT GCATTTTGAA GAGAGTACTT ATGCCGACCT CCCTTATAAG TTTGAAGCAG GTACTCCTAA TATTTGTGGA GGTATTGCGT TTGGAACTAC AATTGACTAT ATACAGCAAT TGGGAATGGA AGCTATTGCT ACACACGAAC ACAAACTATT AGAATATGCT ATCGCTAAAT TACAAAATAT AGAAGGCATT ACTCTTTACG GTAATGATGA TTTGAGTAAG CGTACCGCTG TTATATCATT TAACTTACAA AACATTCACC CTTACGATGT AGGTGTAATT CTCGACCAAT TTGGAATTGC TGTACGTACG GGGCATCATT GTGCCCAACC TATTATGGAC TTCTACTGCA TACCAGGTAC AGTTCGTGCC AGCTTTGCTG TTTACAATAC CTTTGAAGAA ATAGATACCT TTGTAGAAGC TGTAAAAAAA GCTCAGAAAA TGTTAAGCTG A
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Protein sequence | MKSILEIRTD FPILSRTIHN KPLIYFDNGA TSQTPTQVIE AIVHYYSYQN ANIHRGVHTL SQEATDAYEE ARKKLQRHFN ARKSSEILFT AGTTHGINLV ANGYSALMQE RDEVIISASE HHSNIVPWQL ACQRSGATLK VIPMNEKGIL DLEVYNQLLN KRTKIVCVQH VSNALGNIHP IEEIIEKAHR VGAVVLVDGA QAAPHLQPDM QTLDVDFYAV SAHKMYGPTG IGALYGKEEL LLQLPPYQGG GEMIKEVHFE ESTYADLPYK FEAGTPNICG GIAFGTTIDY IQQLGMEAIA THEHKLLEYA IAKLQNIEGI TLYGNDDLSK RTAVISFNLQ NIHPYDVGVI LDQFGIAVRT GHHCAQPIMD FYCIPGTVRA SFAVYNTFEE IDTFVEAVKK AQKMLS
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