Gene Coch_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1831 
Symbol 
ID8368279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2188066 
End bp2188764 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content39% 
IMG OID644984273 
ProductDolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_003141937 
Protein GI256820658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.298246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAATTG TCATTCCTAC ATATAACGAA ATTGAAAATA TAGAAGCTAT CATAAAGGCT 
GTATTTGCCC AAAGTGATAA GTTTCACATT CTTATTGTAG ACGACAATTC TCCTGATGGT
ACTGCCGATA AGGTACGCGA ATTACAAAAT ATTTACCCTA ACCGACTTTT TTTAGAGGTA
CGCACAGAGA AAAAAGGCTT AGGAACAGCT TATATTTACG GCTTTCAGTG GGCATTAGCA
CGCGACTATG AATATATTTT TGAGATGGAT GCCGATTTCT CTCACAGCCC TACTGACCTC
TTACGACTTT ATGAGGCTTG TCAGCAAGGT GCTGATGTAG CAATTGGGTC GCGTTATGTG
AAAGGTGTGA ATGTAGTGAA TTGGCCTTTG CAACGCATCT TGTTATCCTA TGGGGCTTCT
ATCTATGTGA GGGTGATTAC AGGAATGAAA ATCAAAGACC CTACTGCTGG CTTTGTGTGT
TACCACCGAA GGGTATTAGA GAGCATCGAC CTGAATACTA TCCGATTTGT AGGCTATGCC
TTTCAAATAG AGATGAAGTA TCGTGCTTAC CTCAAGAAGT TTAAAATCAC TGAAGTACCT
ATCATCTTTA CCGATAGAAC TAAAGGAAAA TCAAAAATGA ATAAAAGCAT TATCCGTGAA
GCTATCTTTG GCGTTATCGG AATGCGATTT AAAAAATAA
 
Protein sequence
MLIVIPTYNE IENIEAIIKA VFAQSDKFHI LIVDDNSPDG TADKVRELQN IYPNRLFLEV 
RTEKKGLGTA YIYGFQWALA RDYEYIFEMD ADFSHSPTDL LRLYEACQQG ADVAIGSRYV
KGVNVVNWPL QRILLSYGAS IYVRVITGMK IKDPTAGFVC YHRRVLESID LNTIRFVGYA
FQIEMKYRAY LKKFKITEVP IIFTDRTKGK SKMNKSIIRE AIFGVIGMRF KK