Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1783 |
Symbol | |
ID | 8368230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2123740 |
End bp | 2124585 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644984224 |
Product | modification methylase, HemK family |
Protein accession | YP_003141889 |
Protein GI | 256820610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTA GTGAGCTAAG AGAGTATGTA CATCATAAAT TAGAAATACT TTATCCTAAG AGTGAAATAA ATGCGTTTTA CTTTATTCTT TTAGAGCATT ATGGGAAGTA CAGTAAAGCT ACAATATTAG CAAATTCTGA TACTTTACTT ACTGAAGATA TAGCACAACC TATTTTGCAA GCGATTAGAG AATTACAAAC AGCGAAACCC ATACAGTATA TTTTGGGTGA AACTGAGTTC TTCTCTAATC GTTTTTTCGT AAATGAAAAT GTATTGATAC CTCGACCAGA AACAGAAGAG CTAGTGGATT GGGTACTTCA AGAATATCCT GACAAAAGCG AGAAAATCAA AATATTAGAT GTAGGGACAG GCAGTGGCTG TATTGCTATT TCACTTGCTA AAGCTCTTCC TAATGCCGTA GTAACAGCTA TAGATGTCTC GGAAGAAGCT TTGAAAGTAG CTAAGCGTAA TGCTGAATTA AACAGTGTAG TTACTCATTT TTTACAACAA GATATCTTGC GAATAGAAAC TCTTTCTGAT AAATATGATA TCATTATCTC TAATCCGCCC TACGTACGTG AGTTAGAAAA AAAAGAGATA CACCATAATG TTTTAGAATA TGAGCCTCAT TTAGCACTCT TTGTCCCTGA TAATAATCCA TTATTATTTT ACGATAAAAT AGCTACTCTT GCTCAGCAGA GTTTAAATCC TAATGGGAGT CTTTTCTTTG AAATTAATCA GTATTTAGGG CAAGAAATGC AAACATTATT AGAACAAAAG CATTTTACTG AGATAACTTT ACGTCAAGAC CTTTTTGGAA ATGATCGTAT GATAAAAGCT AAGTAG
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Protein sequence | MTFSELREYV HHKLEILYPK SEINAFYFIL LEHYGKYSKA TILANSDTLL TEDIAQPILQ AIRELQTAKP IQYILGETEF FSNRFFVNEN VLIPRPETEE LVDWVLQEYP DKSEKIKILD VGTGSGCIAI SLAKALPNAV VTAIDVSEEA LKVAKRNAEL NSVVTHFLQQ DILRIETLSD KYDIIISNPP YVRELEKKEI HHNVLEYEPH LALFVPDNNP LLFYDKIATL AQQSLNPNGS LFFEINQYLG QEMQTLLEQK HFTEITLRQD LFGNDRMIKA K
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