| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1768 |
|---|
| Symbol | |
|---|
| ID | 8368214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2106208 |
|---|
| End bp | 2108373 |
|---|
| Gene Length | 2166 bp |
|---|
| Protein Length | 721 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644984208 |
|---|
| Product | dipeptidyl-peptidase 7 |
|---|
| Protein accession | YP_003141874 |
|---|
| Protein GI | 256820595 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0506828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TCAGTCTTAT ACTGTTGGCT TTTTTATTGC TCACTCCCAT AGCAAAAGCC
GACGAAGGAA TGTGGTTTTT GATGTTCATC GAACGTCTCA ACCAAAGAGA TATGCAGAAG
TTAGGCTTAC AACTCACTGC TCAAGAAATT TATAGCATCA ATAATAACAG TCTCAAAGAT
GCTATCGTAC AATTTAATGG AGGTTGTACT GCGAGTATCA TCTCCAAAGA TGGCTTAGTG
CTCACCAACC ACCATTGTGG CTATGGCAAT ATCGCTCAGC TCTCCACACC TGAAAACAAC
CATCTAAAAA ACGGATTCTG GGCACGCTCT CACGCCGAAG AACTTTCTCC TAAGCAATCA
TTCGTGCGTT TCTTTGTGCG TATGGACAAT GTAACCGACC GTATGCTATC AGTGGTAAAA
CCTTCAATGA ACGAAAAAGA ACGCGAAGCT GCTCTTAACC AAGAAATGGC TAAAATACAA
AAAGAGAACA GCGAAGGGGG TAAATACGTA GTTTCAGTAC GTCCATTCTT CCAAGGTAAT
GAATATTATT ACTTCGTATA CCAAGATTTT AAAGATGTAC GACTTGTAGG TACGCCTCCT
GAAAGCATTG GAAAATTCGG TGGCGATACC GATAATTGGG AATGGCCTCG CCAAACAGGC
GACTTCTCAC TTTTCCGCGT TTACACTGAT AAAGACGGTA ATGCCGCCGA CTATTCACCT
AATAACGTAC CTCTTAAAGC AAAACGTTAT CTTAAAGTGA GCCTTAAAGG CGTGCAAGAT
AAAGATTTTG CAATGATTAT GGGATACCCA GGACGTACCA ACCGTTGGGA AAGCTCTTAT
TGGGTAGACC AAAACGTAAA ATATGCCTAT CCTGCGTGGG TAGAAGCCTC TAAAACAGCT
ATGGACGCAA TGAAGCGCTT TATGGATAAA GACGATGCTG TACGCTTGCA ATACGCTTCA
CAATATTCAA GCATTGCCAA TTATTGGAAA AACCGCCAAG GTATGATTGA TGCACTTACG
GCTCATAAAA CAGCAGCTAC TAAGCGTAAA ACCGAAGCTA TTTTCGCCAA ATGGGCTAAT
AAAGCTGAAA ATAAGGCTGA ATATGGCGAC GTACTGAACA CTTTATCTAA TTTCTTTGAA
AAAACCAATG CTAAATCAGC CGATGAGAAT TATTTGGGTA TGCTATGGCG TGCTTCTTTC
TTCGTAAAGA TTCCTACACG TTACATTAGC TTGGTAAGTA ATGCTAAAAA AGGTGGTATG
CCTACCGACG AATTGGAGAA AAGAGTGGAC GACCTACTCA CTGAGTACGA TAAAGTAAAC
TTAGACGTAG AAAAGGCTAT CCTTGCCGAT ATGCTGAAAT TATACACTAA CAAAGGTACT
GATGTCCCCT CTGAACTCAA AACTATTAAA ACACAGTACA AGGGTGATTT TAACAAATAC
GTAGAAGAGC TTTTGGCTAA GAGTATCTAC CGTAGCAAAG AAACTGCTAA AGAAGGTGTT
TTTCCTAAAA ACAAAGTCTT TCAAAATGAA AAGCAGATAA ATATGGCTTT AGCAAGCGAC
CCTATTTTAG CACTTTCTAT AGCACTTTTT GTTAACTATC GCAACCCTTC AGAAGAACAA
CTTAGCTTAG AAGACAGCTA TGCCAAAGCC TTCCGCAAGT TCATAAAAGG TATGCGCGAT
TCTAAAATCA GTACTATCTT GTATCCCGAT GCCAATTCTA CCCTGCGCCT TACCTATGGT
ACGGTCATTC CATTGGCTGC CGATAAACGC AACCCCGATG TGAAGAAGAA CTACTATACT
ACCTTCAATA CCCTAATGGC AAAGTACAAA AAAGGCGATG CCGAATTTGA TATGCCACAG
CGTATGCTCG ACCTTTATAA GAAGAAAGAG TTTGGAAGGT ATATAGACAA AGACGGTTCT
ATGCACGTAA ACTTCCTTAC TAATAACGAT ATCACAGGTG GTAACTCAGG TTCGCCTGTA
ATGAATGGTA AAGGAGAACT CATAGGGCTT GCTTTCGACG GCAATATCGA AGCAATGGCA
GGCGATGTAA TCTTCGACAA ACAACTACAA CGCACTATCA ACGTAGATAT CCGCTACGTC
CTCTGGGTAA TCGATATTTA TGCCGGAGCC AAGAACATTA TAAATGAAAT AGAAACAGTA
CAGTAG
|
|---|
| Protein sequence | MKKISLILLA FLLLTPIAKA DEGMWFLMFI ERLNQRDMQK LGLQLTAQEI YSINNNSLKD
AIVQFNGGCT ASIISKDGLV LTNHHCGYGN IAQLSTPENN HLKNGFWARS HAEELSPKQS
FVRFFVRMDN VTDRMLSVVK PSMNEKEREA ALNQEMAKIQ KENSEGGKYV VSVRPFFQGN
EYYYFVYQDF KDVRLVGTPP ESIGKFGGDT DNWEWPRQTG DFSLFRVYTD KDGNAADYSP
NNVPLKAKRY LKVSLKGVQD KDFAMIMGYP GRTNRWESSY WVDQNVKYAY PAWVEASKTA
MDAMKRFMDK DDAVRLQYAS QYSSIANYWK NRQGMIDALT AHKTAATKRK TEAIFAKWAN
KAENKAEYGD VLNTLSNFFE KTNAKSADEN YLGMLWRASF FVKIPTRYIS LVSNAKKGGM
PTDELEKRVD DLLTEYDKVN LDVEKAILAD MLKLYTNKGT DVPSELKTIK TQYKGDFNKY
VEELLAKSIY RSKETAKEGV FPKNKVFQNE KQINMALASD PILALSIALF VNYRNPSEEQ
LSLEDSYAKA FRKFIKGMRD SKISTILYPD ANSTLRLTYG TVIPLAADKR NPDVKKNYYT
TFNTLMAKYK KGDAEFDMPQ RMLDLYKKKE FGRYIDKDGS MHVNFLTNND ITGGNSGSPV
MNGKGELIGL AFDGNIEAMA GDVIFDKQLQ RTINVDIRYV LWVIDIYAGA KNIINEIETV
Q
|
|---|
| |