Gene Coch_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1736 
Symbol 
ID8368182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2069909 
End bp2070910 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content44% 
IMG OID644984176 
Productoxidoreductase domain protein 
Protein accessionYP_003141842 
Protein GI256820563 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTA ATGTAGCCCT TGCCAGTTTT GGTATGAGTG GACGGGTATT TCACGCTCCT 
TTCGTAGCAC AACACCCACA GTATCACCTC TATGCGATAG TAGAACGCCA TCGTTCCGAT
TCGCACGCTC TATATCCTGG TGCTAAACTT TATCGCTCAG TAAACGAAAT GCTACAAGAC
CCTGTGGTAG ATTTGGTAGT GGTCAATACC CCCGTGCAAA CCCATTATGA GTATGCCAAA
GAAGCGTTAT TAGCAAATAA GAATGTATTG GTAGAAAAGC CTTTTACCGT TACTGTCGAG
CAGGCTGAAG AACTCAATAC ATTAGCTACA AAACAAGGCA AGCTGCTTTC CGTTTACCAA
AATAGGCGTT ATGATGGCGA TTATTTAAAG GTAAAAGAAA TAGTAAACAG TGGTGTACTG
GGCGAACTTA AAGAAGTAGA AATGCGCTTC GACCGTTTCC GAAGTGAAAT TAGTGCCAAG
GCTCATAAGG AAACTCCCGA ACGTGGGGGA GGGGCTCTCT ACGATTTAGG AGCACATCTC
ATAGACCAAG CGCTCCAGCT ATTCGGTACT CCTAAAAACG TATATGCCGA TTTGGGTTAC
CTTCGTAAAG GTACTCAAAC CGACGACTAT TTTGAACTGA TTCTCTTTTA CGAAAACGAA
CTACGTGTCC GCCTTAAATC CACTACCTAT GCTTTGGAAC GCCAATGGGA GTACACCTTG
CACGGCACTA AGGGTTCCTT CCTTCAACAG CGGTTCGACG GACAAGAAAA TGCCTTAGTA
GCGGGTACTA TCCCTTCAGC CTCTCAGTGG CTACCTTCTG TTACCGAACC TAATGGCATT
CTCCATACAA TTGAAAAGCG TTTGTTTACT ACCGCCCAAC ACGGTAACTA TTGGCTTTTT
TATAACGACC TTTACCAAGC TTTAACAGGC AAAGGTACCA ATCCCGTACC TGCCACTCAA
GCCGTTGAAA TTATCAAAAT TATTAGTCAA TTTAGCCAAT AA
 
Protein sequence
MTINVALASF GMSGRVFHAP FVAQHPQYHL YAIVERHRSD SHALYPGAKL YRSVNEMLQD 
PVVDLVVVNT PVQTHYEYAK EALLANKNVL VEKPFTVTVE QAEELNTLAT KQGKLLSVYQ
NRRYDGDYLK VKEIVNSGVL GELKEVEMRF DRFRSEISAK AHKETPERGG GALYDLGAHL
IDQALQLFGT PKNVYADLGY LRKGTQTDDY FELILFYENE LRVRLKSTTY ALERQWEYTL
HGTKGSFLQQ RFDGQENALV AGTIPSASQW LPSVTEPNGI LHTIEKRLFT TAQHGNYWLF
YNDLYQALTG KGTNPVPATQ AVEIIKIISQ FSQ