| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1712 |
|---|
| Symbol | |
|---|
| ID | 8368158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2046224 |
|---|
| End bp | 2047804 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644984152 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_003141818 |
|---|
| Protein GI | 256820539 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000192165 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA TAAAAGCCGC TGAAATTTCA GCAATTTTAA AAGAACAATT AGCGCACTTC
GATGCCAATG CTTCTTTAGA AGAAGTAGGA ACGGTATTAC AAGTGGGAGA TGGTATTGCG
CGTATCTTTG GACTATCGAA TGCGCAATAT GGTGAATTAG TGAAATTTGA CAACGGACTA
CAAGGGATTG TCCTCAACCT CGAAGAAGAC AACGTGGGGA TTACCCTCTT AGGACCGTCA
ACTGATATTA AAGAAGGTGA TACTGTAAAA CGCACGGGGC TCATCGCCTC TATCAATGTA
GGCGAAGGTA TCGTAGGTCG TGTGGTAAAC ACCTTAGGGC AACCCATTGA TGGTAAAGGT
CCTATTACTG GCAAACTATA CGAAATGCCG TTGGAACGCA AAGCCCCTGG GGTAATCTTC
CGTCAGCCTG TAAACGAACC TCTACAAACA GGTATCAAGG CTATCGACGC AATGATTCCT
ATCGGTCGCG GACAACGTGA GTTAGTGATT GGTGACCGAC AAACGGGTAA AACTACCGTG
TGTATCGACA CTATCCTCAA CCAAAAAGAG TTCTACGATG CGGGCAAACC AGTATATTGC
ATCTATGTGG CTATTGGTCA GAAAGCTTCT ACCGTAGCAG GTATCACTAA AACCTTAGAA
GATGCGGGTG CTTTGGCTTA TACTACCATT GTAGCAGCTA ATGCTTCTGA TCCTGCTCCT
ATGCAGGTAT ATGCACCTTT CGCAGGAGCT GCTATTGGGG AATACTTCCG TGATACAGGT
CGCCCAGCTC TTATTATCTA CGACGACCTT TCTAAACAAG CGGTAGCTTA CCGTGAGGTA
TCACTTCTAT TACGCCGCCC ACCTGGACGT GAGGCTTACC CTGGTGATGT GTTCTACTTG
CACTCTCGCT TATTAGAGCG CGCTGCCAAA GTAATTAATG ATGATACTAT CGCACGCCAG
ATGAACGACC TACCCGAAAG CATTGCACCA CTCGTAAAAG GAGGAGGTTC TCTCACTGCT
TTGCCAATCA TCGAAACTCA AGCGGGTGAC GTATCAGCCT ATATCCCTAC TAACGTGATT
TCTATTACTG ACGGACAGAT ATTCTTGGAG TCCGATTTGT TCAACTCAGG GGTACGTCCA
GCTATCAACG TGGGTATTTC GGTATCGCGT GTGGGAGGTT CAGCACAGAT TAAATCGATG
AAGAAAGTAG CGGGTACCCT CAAATTAGAC CAAGCACAAT ACCGCGAACT CGAAGCTTTT
GCCAAATTCG GCTCTGACCT CGATGCAGCT ACTATGGGGG TTATCGAAAA AGGAAAACGC
AATGTGGAAA TCTTGAAACA ACCACAAAAC GACCCTTACC CCGTAGAAAA CCAAATTGCA
ATTATCTATG CAGGTTCTAA AAACTTATTG AGACAAGTGC CTGTGGACAA GATAAAAGAA
TTTGAGAGAG AATATTTAGA GTTCCTCAAT GTATCCCATC GTGACATTTT AGACGAGCTA
AAAGCTGGCA AACTCACCGA TGAGATTACA GCTACTCTCG AAAAAGTAGC GAAAGATTTG
AGTGAAAAAT ACGCAAAATA G
|
|---|
| Protein sequence | MAEIKAAEIS AILKEQLAHF DANASLEEVG TVLQVGDGIA RIFGLSNAQY GELVKFDNGL
QGIVLNLEED NVGITLLGPS TDIKEGDTVK RTGLIASINV GEGIVGRVVN TLGQPIDGKG
PITGKLYEMP LERKAPGVIF RQPVNEPLQT GIKAIDAMIP IGRGQRELVI GDRQTGKTTV
CIDTILNQKE FYDAGKPVYC IYVAIGQKAS TVAGITKTLE DAGALAYTTI VAANASDPAP
MQVYAPFAGA AIGEYFRDTG RPALIIYDDL SKQAVAYREV SLLLRRPPGR EAYPGDVFYL
HSRLLERAAK VINDDTIARQ MNDLPESIAP LVKGGGSLTA LPIIETQAGD VSAYIPTNVI
SITDGQIFLE SDLFNSGVRP AINVGISVSR VGGSAQIKSM KKVAGTLKLD QAQYRELEAF
AKFGSDLDAA TMGVIEKGKR NVEILKQPQN DPYPVENQIA IIYAGSKNLL RQVPVDKIKE
FEREYLEFLN VSHRDILDEL KAGKLTDEIT ATLEKVAKDL SEKYAK
|
|---|
| |