Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1676 |
Symbol | |
ID | 8368122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2002456 |
End bp | 2003355 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644984116 |
Product | chaperone DnaJ domain protein |
Protein accession | YP_003141782 |
Protein GI | 256820503 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.338376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATT ACTATAAAAC CTTAGGGGTA GAAAAAACTG CTACCCAAGA TGATATAAAG AAGGCTTACC GCAAGTTGGC GCGCAAGTAT CACCCTGATA TGAATCCTAA CGATAAGACG GCAGAGCAGA AATTTAAAGA GATTAACGAG GCTAACGAAG TACTTAGCAA TCCTGAAAAC CGTGCTAAAT ACGACAAGTA TGGCGAACAC TGGAAATACG GAGAAGAATA CGAAAAAGCC CAACAACAGC AACGCTCCCA AGGTGGTTTT GGAGGATTTG AAGGCTTTGG TGGAGGTAAC TACTCTGAGG GAGACTATTC TGATTTCTTC AGAGATATGT TTGGCGGACG GACTTCGGGA TTTGGTAGAG GTTACGGTAG TGCCTCAGGT AAGTTTAAAG GACAGGATAT TTTTGCGGAT ATGTCGCTAC CACTGCGAGA AGTGGCAACT GCTCAGCAAC GTACTTTTAC GGTGAACGGC AAGAATATAC GTATTACAGT ACCTGCGGGG GTATATGAAG GGCTGCAAAT TAAGCTAAAG GGTCACGGAT ACGAAGGATA TAACGGAGGA CCTAACGGTG ATTTGTATAT CACTTTCCAT ATTGAACCCG ACGCTCAGTT TGAACGCAAT GGCAACGATT TGAAAACTAC TGTAAATATC GACCTATATA CAGCTATGTT AGGTGGCGAA GTGCAGATAG ATACCCTCAG TGGTAAAGTG AAAATGAAAG TAGCTCCTGA GACACAAAAT GGCACTACGG TGCGCTTAAA AGGTAAAGGT TTTCCTGTGT ACAAGCAAGA AGGCTCATTT GGCGACCTTT TTGTAACGTA TCAAGTACAA TTGCCTAAAA ATCTTACGGA ACAACAAAAA GCATTATTTG AACAACTTAA AAATTCATAA
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Protein sequence | MIDYYKTLGV EKTATQDDIK KAYRKLARKY HPDMNPNDKT AEQKFKEINE ANEVLSNPEN RAKYDKYGEH WKYGEEYEKA QQQQRSQGGF GGFEGFGGGN YSEGDYSDFF RDMFGGRTSG FGRGYGSASG KFKGQDIFAD MSLPLREVAT AQQRTFTVNG KNIRITVPAG VYEGLQIKLK GHGYEGYNGG PNGDLYITFH IEPDAQFERN GNDLKTTVNI DLYTAMLGGE VQIDTLSGKV KMKVAPETQN GTTVRLKGKG FPVYKQEGSF GDLFVTYQVQ LPKNLTEQQK ALFEQLKNS
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