Gene Coch_1668 details

Gene Information

• Locus tag: Coch_1668
• Symbol: rplI
• ID: 8368114
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1993203
• End bp: 1993730
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 644984108
• Product: 50S ribosomal protein L9
• Protein accession: YP_003141774
• Protein GI: 256820495
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.197637
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTA TACTAAAACA AGACGTACAT AATTTAGGTT TTAAGGACGA TGTCGTTACA 
GTAAAGAACG GCTACGGACG TAATTACCTC ATTCCGCAAG GATTTGCAAT TTTGGCTACT 
CCCTCAGCAA AAAAGGTATT AGCTGAAAAT TTAAAACAGA AAGCTTACAA AGAGCAACAC 
ATTATTGATG AGGCTAAGAA AACAGCTCAA GCACTTTCGT CATTGGTGGT AAAAATTATT 
GCCAAAGTAG GTGCTGGAGA TAAGCTTTTT GGGTCAATTA ATAATGGTGA TTTGGCACAA 
GAATTAGCCA AAGCGGGTCA CGATATTGAT AAGAAATTTA TTTCTATCGC TGGTAACACC 
CTCAAACGTG CTGGGAAATA CAATGCTTCT ATCCGTTTAC ACCGTGAAGT AATTGTTGAT 
TTTCCATTTG AAATTGTAGC AGAAGTAGCA AAAGTAGAGA CAAAACCTGC AGAAAAGACT 
GAAGAGCCCA AAGCGGAAAT TGCTACTGAG CAACCTGCTG GAAACTAA 

 

Protein sequence

MEIILKQDVH NLGFKDDVVT VKNGYGRNYL IPQGFAILAT PSAKKVLAEN LKQKAYKEQH 
IIDEAKKTAQ ALSSLVVKII AKVGAGDKLF GSINNGDLAQ ELAKAGHDID KKFISIAGNT 
LKRAGKYNAS IRLHREVIVD FPFEIVAEVA KVETKPAEKT EEPKAEIATE QPAGN