| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1667 |
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| Symbol | rpsR |
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| ID | 8368113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1992907 |
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| End bp | 1993185 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644984107 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_003141773 |
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| Protein GI | 256820494 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.088074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTAG AACAAAAAAA AGGAGATATC AAATATCTTA CTCCGCTAAA CATCGACACT
TCAAAACAAA AGAAATATTG TCGTTTTAAA AAATCAGGTA TTAAATACAT TGATTACAAA
GATGCTGACT TCCTCTTGAA GTTTGTAAAC GAACAAGGTA AGTTGTTACC TCGTCGTCTT
ACAGGTACTT CATTGAAGTT CCAACGCAAG GTGGCTACCG CTGTGAAGAG AGCACGCCAC
TTGGCATTAA TGCCTTATGT AGCCGATTTA TTAAAATAA
|
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| Protein sequence | MAVEQKKGDI KYLTPLNIDT SKQKKYCRFK KSGIKYIDYK DADFLLKFVN EQGKLLPRRL
TGTSLKFQRK VATAVKRARH LALMPYVADL LK
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