Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1621 |
Symbol | |
ID | 8368067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1935263 |
End bp | 1936006 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644984061 |
Product | ABC transporter related |
Protein accession | YP_003141727 |
Protein GI | 256820448 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.724922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAG TAGTAAATAA CATCATCAAA ATATACAAAG GAAGAAAAGT AGTAAAAGGC GTTTCGCTGG AAGTAAACCA AGGTGAAATC GTAGGACTCT TGGGACCTAA CGGAGCAGGA AAAACGACTT CCTTTTATAT GATAGTGGGA CTCATCAAGC CCAACGGTGG TACTATTTTT TTGGATAATA CCGAAATCAC CAGTTATCCG ATGTACAAAC GTGCTCAAAG CGGTATTGGG TATTTGGCAC AAGAGGCTTC GGTATTTAGA AAGCTGAGTA TTGAGGACAA TATCAAAAGT GTCCTACAAC TCACCAAACT TTCTAAGGCA GAACAACAAC GCAAAACCGA TGAGCTGATA GAAGAGTTTG GCTTAGGACA TATTCGTAAA AATCGTGGAG ACTTGCTTTC AGGGGGAGAA CGTCGTCGTA CAGAAATTGC ACGAGCTTTG GCTACTAGTC CGAAGTTTAT TTTGCTCGAC GAGCCCTTTG CAGGGGTAGA CCCTATAGCG GTGGAAGATA TCCAACGCAT TGTAGCACAG CTCAAAGACA AGAATATAGG TATTCTCATC ACCGACCACA ATGTACAGGA AACACTAGCC ATTACCGACC GCACTTATTT GATGTTCGAG GGAGGAATCC TCAAATCAGG AGTGCCTGAA GAATTGGCAG CTGATGAGAT GGTAAGAAAA GTATACCTTG GAAGAAACTT TGAATTGAGA CGCAAGAAAA TATTAGAAGA TTAG
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Protein sequence | MKLVVNNIIK IYKGRKVVKG VSLEVNQGEI VGLLGPNGAG KTTSFYMIVG LIKPNGGTIF LDNTEITSYP MYKRAQSGIG YLAQEASVFR KLSIEDNIKS VLQLTKLSKA EQQRKTDELI EEFGLGHIRK NRGDLLSGGE RRRTEIARAL ATSPKFILLD EPFAGVDPIA VEDIQRIVAQ LKDKNIGILI TDHNVQETLA ITDRTYLMFE GGILKSGVPE ELAADEMVRK VYLGRNFELR RKKILED
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