Gene Coch_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1606 
Symbol 
ID8368052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1915491 
End bp1916549 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content40% 
IMG OID644984046 
ProductL-asparaginase, type II 
Protein accessionYP_003141712 
Protein GI256820433 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00520] L-asparaginases, type II 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.57786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAT TGATGAAAAA AATTGCCCTC TCATTGCTCT TAATGATGAC TGTAGCAGTC 
TTTGCGCAAC AAAAGCCAAA GATTCGTATT TTAGCTACTG GCGGTACTAT CGCTGGAGTA 
AGTAAATCGA ATACTGAAAC CAACTATAAA GCTGGTGAGA TCGGTATTTA CCAACTCTTA 
GACGCAGTAC CTGAAGTGAA GAACGTAGCC AATGTAAGTG GTGAACAGAT TGTGAAAATC 
GGTTCACAAG ATATGAACGA TGAGGTATGG CTCACCCTTG CCAAACGCAT CAATCAATTG 
CTCAACAAAG AAGGATACGA CGGAGTGGTA ATCACTCACG GTACCGATAC AATGGAAGAA 
ACCGCCTACT TCCTCAACCT TACCGTACAC AGCAAAAAAC CTGTGGTAAT GGTAGGAGCA 
ATGCGTCCTG CTACCGGTAT GAGTGCCGAT GGTCCTCTAA ACCTCTATAA CGCAGTAGTA 
ACTGCTGCCG ATAAAAATGC TATGGGACGT GGAGTAATGG TTTGTATGAA CGATATTGTA 
CTTGATGCTA AAGATGTGAT TAAAACCAAT ACTACAGCTG TCGAAACTTT CCAAGGTGCT 
AACTATGGCA AATTGGCATA CATTCACAAC GGTAAGGTAT TCTTTAATCG TACTCCTGAA 
AACAAACACA CTTATCAATC AGTGTTTAAT GTTGATAATT TGAAACAATT GCCTAAAGTA 
GGTATCGTAT ACAGTTATTC TAATGTATCT GAATTACCAA TGAAAGCTTT TATGGACGCT 
AAATTCGATG GTATTGTACA CGCAGGAGTA GGTAATGGTA ACCTCTATCA CACTATTTTC 
GATTTGGCAG TAAAAGCTAG AGAGCAAGGC ATTCAGTTTG TGCGTTCTTC ACGCGTACCT 
ACAGGAGCAA CAACTCTCGA TGCCGAAGTA GACGATGCTA AATATCAATT TGTAGCTTCA 
CAAACACTCA ACCCACAAAA AGCTCGTGTT CTATTGATGT TGGCACTCAC TAAAACTAAG 
GATTGGAAAC AAATCCAAAA ATACTTTAAT GAATATTAA
 
Protein sequence
MMTLMKKIAL SLLLMMTVAV FAQQKPKIRI LATGGTIAGV SKSNTETNYK AGEIGIYQLL 
DAVPEVKNVA NVSGEQIVKI GSQDMNDEVW LTLAKRINQL LNKEGYDGVV ITHGTDTMEE 
TAYFLNLTVH SKKPVVMVGA MRPATGMSAD GPLNLYNAVV TAADKNAMGR GVMVCMNDIV 
LDAKDVIKTN TTAVETFQGA NYGKLAYIHN GKVFFNRTPE NKHTYQSVFN VDNLKQLPKV 
GIVYSYSNVS ELPMKAFMDA KFDGIVHAGV GNGNLYHTIF DLAVKAREQG IQFVRSSRVP 
TGATTLDAEV DDAKYQFVAS QTLNPQKARV LLMLALTKTK DWKQIQKYFN EY