Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1600 |
Symbol | murE |
ID | 8368045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1908615 |
End bp | 1910075 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644984039 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_003141706 |
Protein GI | 256820427 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.285187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAA AAACATTACT TAAAAACATC ACTATAAAAA CTTCCCTTTA TGTGGAAGAT AAAGATATTA CCTCCGTTTG CTTCGACTCT CGAAAGGCGG AAAAAGGAAG TATGTTTGTT GCCATCACGG GTACGCAATC TAACGGACAC GAATACATAG ACCAAGCTAT ACGCAGTGGC GCAACCGCTA TTGTATGTGA GCAATTACCT CAACAACCTT TGCCTGGTGT AAGTTATATA GTAGTCCCCA ATAGTCATAG TGCTTTAGCC TTGATTGCAG CTAACTTCTA TGGCAATCCT TCTGAAAAAC TTATCTTAGT AGGCGTAACA GGCACTAACG GAAAGACTAC CATTGCAACG CTTCTCTACC AATTGTTTAG AAAAGCAGGA CAAAAAGCGG GGTTGCTCTC CACAGTGGCG GTATACGTAG ACGACCAGTG CTTTGAAGCA ACTCACACTA CCCCCGACCC TCTTCAACTG AATCATTATC TGCACTTAAT GGTAGAACAA GGGGTGAAAT ATTGCTTTAT GGAAGTGAGC TCTCACGGCA TCGACCAGCA TCGTACTGAA GGACTACAGT TCGCAGGAGG TATCTTCACT AACCTCACCC GCGACCACCT CGATTATCAC AAGACCTTCG CTGCCTATCG CGATGTGAAA AAGCGCTTCT TTGATGCGTT ACCCGCTACC GCTTTTGCCT TAGTAAACAA CGATGATAAG AATGGGGCTT TTATGCTACA AAATACCAAA GCCCAAAAGA AAACATACGC ACTCAAAACT CACGCAGATT ATAAGGCATA TATCATTGAG AGCAGATTTG ACGGCTTGCT GTTGCGTATC AATCAGCACG AGGTATGGAC AAAACTCATA GGTGAGTTTA ATGCTTATAA CCTTTTGGCG GTATATGCTA CAGCTACTCT ATTGAGTATT GACGAAATTG AGGCTCTTAC TCTTATCAGC GCCATAGAAC CTGTGGCAGG ACGTTTTCAG TATGCAGTAT CGGCTACGGG AGTGATTACC ATAGTGGATT ATGCTCATAC CCCCGATGCC CTTGAAAACG TTCTGAAAAC CATTAACGAT ATACGCACTC ACAACGAGAC CCTCACTACT GTAGTGGGCT GTGGAGGCAA TCGCGACAAA GGTAAACGTC CTATAATGGC TGATATAGCT ACAACCCTCA GCGATAATGT AATCCTCACT TCCGACAATC CTCGCAACGA AGAACCTGAG ACAATTCTTT CCGAAATGCA ACAAGGGGTA CAGCCACAAT ACTTTCACAA AGTACAAACC ATCACCGACC GTCGTCAGGC AATACAATCC GTTTGCAAGA ATGCCAAAAA GGGAGACATC ATTCTCATCG CCGGTAAGGG ACACGAAACT TACCAAGAAA TTAAAGGCGT TAGACACCAT TTCGACGACT TTGAAATTGT ACGGGAATAC TTGGAGCTCT ATAAGAAATA A
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Protein sequence | MNLKTLLKNI TIKTSLYVED KDITSVCFDS RKAEKGSMFV AITGTQSNGH EYIDQAIRSG ATAIVCEQLP QQPLPGVSYI VVPNSHSALA LIAANFYGNP SEKLILVGVT GTNGKTTIAT LLYQLFRKAG QKAGLLSTVA VYVDDQCFEA THTTPDPLQL NHYLHLMVEQ GVKYCFMEVS SHGIDQHRTE GLQFAGGIFT NLTRDHLDYH KTFAAYRDVK KRFFDALPAT AFALVNNDDK NGAFMLQNTK AQKKTYALKT HADYKAYIIE SRFDGLLLRI NQHEVWTKLI GEFNAYNLLA VYATATLLSI DEIEALTLIS AIEPVAGRFQ YAVSATGVIT IVDYAHTPDA LENVLKTIND IRTHNETLTT VVGCGGNRDK GKRPIMADIA TTLSDNVILT SDNPRNEEPE TILSEMQQGV QPQYFHKVQT ITDRRQAIQS VCKNAKKGDI ILIAGKGHET YQEIKGVRHH FDDFEIVREY LELYKK
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