| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1554 |
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| Symbol | purH |
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| ID | 8367998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1846596 |
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| End bp | 1848128 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983993 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_003141660 |
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| Protein GI | 256820381 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0062608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTG CAAAACAAGC TAAATCTGCC TTAATATCTG TTTTCGACAA AACAGGATTA
GAGCCTATCA TTCACAGAAT GAAAACCTTA GGAATTACTA TTTACTCCAC AGGAGGTACC
GAAGATTTTA TCAAAAAATT AGGTGTAGAG GTAGTTCCCG TCGAATCTAT TACCGATTAT
CCCCCTATTT TCGGCGGACG TGTCAAGACG CTCCACCCTA AAATCTTCGG AGGTATTCTC
AACCGTCAGG ATAATGCACA AGATACTGAA GAAATGAAGC AATACGCTAT CCCTCAAATC
GATATAGTGA TTGTAGACTT ATATCCTTTC GAAAAAACAG TAACCAGCGG AGCTAGCGAG
CAAGAGATTA TTGAAAAGAT AGATATAGGA GGTATTTCGC TTATTCGTGC AGCTGCCAAA
AACTATAAAG ATGTACTTTG TGTGGCATCG GTAAACCAAT ATGCTGACCT TTTGTACATC
TTAAACGAAC AGCACGGTAG CTCTACTTTG GAAGAGCGCC ACTCCTTTGC TACTAAGGCT
TTCCGAGTAT CCTCACACTA CGATACCGCT ATCTTCAACT ATTTTAATCA AACAGAAGAA
ATTCCTACCT TAGCAATTAG CGAGTGCGAC GGACAAGTAC TACGCTACGG CGAAAACCCT
CATCAAAAAG GAGAATTTTA CGGTAATTTC GATGCCCTTT TCGATAAACT ACACGGCAAA
GAGCTCTCTT ATAACAATTT GTTAGATGTA GATGCCGCCG TAAACTTAAT GGCTGAATTT
GTAGGTGACG ACCCTACTTT TGCCATACTG AAACACAACA ATGCTTGTGG GGTAGCAACT
CGCAAAACTA TCCACGAAGC ATATAAAGAT GCTCTTGCAG GCGACCCCGT ATCGGCTTTT
GGTGGCATTC TCATCTCTAA TACTAAGATA GATTCAGCTA CTGCCGAAAC CATTCACTCG
CTGTTCTTTG AGGTAATCAT TGCACCTTCT TACAGCGATG AAGCCTTAAA AATACTCGAA
CAGAAGAAAA ATCGTATTAT TTTAGTACAG AAGAAAGCCA AAATGCCTAC AACAAGTGTG
CGCTCGTGTC TCAACGGCTA TTTGGTACAA GAAAAAGACC TAAAAACCGA TAACATAGAA
GATGTACAAT ACGTAACCGC TGTAAAACCC TCAACTGAAG TGCTCGAAGA CCTCTTTTTT
GCCTCTAAAA TATGTAAGAA TACCAAATCG AATACCATTG TATTGGCGAA GAATAAACAG
CTCATTGCAA GTGGTACAGG ACAAACCAGT CGTGTAGATG CTCTTAAACA AGCTATTGAA
AAGGCTAAAG AATTTCAGTT TGACCTCAAC GATGCAGTAA TGGCAAGCGA TGCTTTCTTC
CCCTTCCCCG ATTGTGTGGA AATCGCTCAC GACGAAGGTA TCCGTTCGGT GATACAACCT
GGGGGTTCTA TCAAAGACCA AGCCAGCATC GATTATTGCG ATGCGCACCA AATGGGAATG
GTATTCACAG GAATACGACA TTTTAAACAC TAA
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| Protein sequence | MSTAKQAKSA LISVFDKTGL EPIIHRMKTL GITIYSTGGT EDFIKKLGVE VVPVESITDY
PPIFGGRVKT LHPKIFGGIL NRQDNAQDTE EMKQYAIPQI DIVIVDLYPF EKTVTSGASE
QEIIEKIDIG GISLIRAAAK NYKDVLCVAS VNQYADLLYI LNEQHGSSTL EERHSFATKA
FRVSSHYDTA IFNYFNQTEE IPTLAISECD GQVLRYGENP HQKGEFYGNF DALFDKLHGK
ELSYNNLLDV DAAVNLMAEF VGDDPTFAIL KHNNACGVAT RKTIHEAYKD ALAGDPVSAF
GGILISNTKI DSATAETIHS LFFEVIIAPS YSDEALKILE QKKNRIILVQ KKAKMPTTSV
RSCLNGYLVQ EKDLKTDNIE DVQYVTAVKP STEVLEDLFF ASKICKNTKS NTIVLAKNKQ
LIASGTGQTS RVDALKQAIE KAKEFQFDLN DAVMASDAFF PFPDCVEIAH DEGIRSVIQP
GGSIKDQASI DYCDAHQMGM VFTGIRHFKH
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