| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1531 |
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| Symbol | |
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| ID | 8367971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1819314 |
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| End bp | 1820132 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983966 |
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| Product | 3-methyl-2-oxobutanoatehydroxymethyltransferase |
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| Protein accession | YP_003141637 |
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| Protein GI | 256820358 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGCAG TTAGAAAAGA ATACAAACGA GTAACTACCA AATCGATAGT AGAGATGAAA
GCCAATGGCG AAAAGATTTC AATGCTTACC GCCTACGATT ATACATTTGC TAAACTATTA
GATAGTGCCG GTATCGATGT GCTATTGGTA GGCGACTCCG CCAGCAATGT AATGGCAGGT
CACGAAACTA CCCTCCCTAT CACCTTAGAC CAAATGATTT ATCACGCCTC ATCAGTAGTA
CGAGGGGTGA GTCGCGCCCT TATAGTGGTA GATTTGCCTT TTGGTACTTA CCAATCCGAC
CCTAAAAAGG CGTTGCGCTC AGCTATTAGA ATAATGAAAG AAAGTGGCGC TCACGCAATT
AAATTGGAGG GAGGTAAGGA GGAAGCCGAG AGCATCAAGC GCATTGTAAA TGCGGGCATT
CCGGTAATGG GACACTTGGG GCTCACTCCT CAATCCATTC ACCAGTTTGG TTCATTCGCT
TTGCGTGCTA AAGAAGAAGC TGAAGCCCAA AAACTCAAAG AAGATGCTAA GTTATTAGAA
CAATTGGGTT GTTTTGCTAT TGTATTAGAG AAAATACCTG CTACATTGGC TGAAGAAGTA
GCCAAGAGTG TGCATATTCC CATTATAGGG ATTGGGGCTG GTAGTGCAGT AGATGGACAA
GTATTGGTGA TGCAGGATAT GCTAGGTATG AGCAATGAAT TCCAGCCTCG TTTCTTGCGC
AAATATGCCA ATTTGCAAGA AGTGATTACT AATGCCGTAT CGCATTACAT CGAAGACGTA
AAAAGCGTCG ATTTTCCTAA CGAAAAAGAA CAGTATTAA
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| Protein sequence | MSAVRKEYKR VTTKSIVEMK ANGEKISMLT AYDYTFAKLL DSAGIDVLLV GDSASNVMAG
HETTLPITLD QMIYHASSVV RGVSRALIVV DLPFGTYQSD PKKALRSAIR IMKESGAHAI
KLEGGKEEAE SIKRIVNAGI PVMGHLGLTP QSIHQFGSFA LRAKEEAEAQ KLKEDAKLLE
QLGCFAIVLE KIPATLAEEV AKSVHIPIIG IGAGSAVDGQ VLVMQDMLGM SNEFQPRFLR
KYANLQEVIT NAVSHYIEDV KSVDFPNEKE QY
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