Gene Coch_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1527 
Symbol 
ID8367967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1815110 
End bp1815619 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content43% 
IMG OID644983962 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003141633 
Protein GI256820354 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.307283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA ATGTAACGCT TAGAATAGCA ATGCCTCAGG ATACTCCTGC TATTTGGGCA 
ATCCTATCTG CTGCTATTGA GCGTCGCAAA GCCGATGGCA GTAACCAGTG GCAAGACGGC
TACCCTAATG AAGAGGTGAT AGCTAACGAT ATCACCCATC AATATGGCTA TGTACTCACA
GAAGACAACG AAATATTAGG CTATGTTGCT CTCCTCATCA ACAGCGAACC TGCTTATGAG
GCTATCAAGG GCAAATGGCT TACCAATGCC GACTTTATGG TATTTCATCG CGTAGCAATT
TCGCCTGACC ATTTGGGGCG TGGCTTAGCA AAGTTTCTTC TTCAAAAGAT AGAGGAAATA
GCTCGCAATA AAGGCATTCC TTCTTTGCGA GCCGATACTA ATTTCGATAA TGCCCCTATG
TTACATCTAT TCGAAAAATT AGGCTATAAG TACTGCGGAG AAGTTACTTT CAGAGGTACT
CCCCGCAAAG CTTTTGAGAA AAAACTATGA
 
Protein sequence
MNENVTLRIA MPQDTPAIWA ILSAAIERRK ADGSNQWQDG YPNEEVIAND ITHQYGYVLT 
EDNEILGYVA LLINSEPAYE AIKGKWLTNA DFMVFHRVAI SPDHLGRGLA KFLLQKIEEI
ARNKGIPSLR ADTNFDNAPM LHLFEKLGYK YCGEVTFRGT PRKAFEKKL