| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1478 |
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| Symbol | |
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| ID | 8367915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1751409 |
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| End bp | 1752953 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983911 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003141585 |
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| Protein GI | 256820306 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAAAG AATTAATCAT TCGTTCTGGT TCCTCTTACG TAGATTTTGC TTTGCTCAGA
GACGGTAGGC TCATCGAACT TCATAAAGAA GAAGATACTA ACGGCTTAGG AGTAGGAGAT
ATAATGCTCG CTAAGGTGCG CAAACCTATA CAAGGGCTCA ATGCAGCTTT TGTAAACGTA
GGTCACGAAA AAGACGCCTT CTTGCATTAT CACGACTTAG GCCCCCAATT AGCTTCTCTA
CTGAAGTTCC TTAAATGGGT AATCTCAGGA AAACTAAAAG ACTTTTCTCT TAAAGATTTT
CCCTTAGAAC CCGATATCGA TAAAAATGGT TCTGTAGCCG AAACACTTAA ACCTAATCAA
CCTATACTGG TACAGATAGT AAAAGAACCT ATCTCCACCA AAGGTCCTCG TATCAGCTCA
GAACTCTCTA TCGCAGGTCG TTATCTCGTG TTGGTTCCCT TTTCTGACCG CATTTCTATC
TCTCAGAAAA TAGAAGGTAA AGCCGAGAAA GAACGCTTGC GTAAACTCTT GCAAGGCATT
AAACCCAAAG GTTTTGGTGT GATTGTACGC ACCGTAGCCG AAGGTAAAAA AGTAGCGGAA
CTCGACAAGG ATTTGCAAAG TCTCTTCAAT CGTTGGGTTT TGATGTGCCG AAAAATTCAA
AAAGCGGTTT TTCCCTCTAA GGTAATGAGT GAAGTGAACA AAACGGGGGC TATCCTCCGC
GATATGTTCA ACGATTCCTT TACAGGTATT CACGTAGATA ATGAGCAACT CTATGAACAG
ATAAAAAAAT ACGTACAAGA AATTGCTCCT GAGAAAGAGA ATATCGTAAA ACTCTATCAC
TCATCAGTGC CTATATTCGA AAAGTTCCAT ATCGAACGAC AAATCAAAAC GGCTTTCGGT
CGCACCGTAT CGATGCCAAA AGGAGCTTAC CTCGTAATAG AACACACCGA AGCCTTACAC
GTGATAGACG TAAACAGTGG CAACCATTCC AATAAAAATA ACGACCAAGA AACCACCGCG
CTATCCGTAA ACCTCATCGC TGCTACCGAA ATCGCACGAC AACTCCGATT GCGCGATATG
GGTGGTATCA TCGTTGTCGA TTTTATCGAT ATGGGCAATA GCGAAAACCG CCGTGTATTA
TTCGACCACT TGCGCAACGA AATGGCTGAA GACCGTGCTA AACACAAAAT CTTGCCTCCG
AGCAAGTTCG GTCTGATACA AATCACACGC CAGCGAGTGC GCCAAGAACT AAACATCAAA
ACAAAAGAAG AGAATCCAAG CAAAGAAGGC GAAATCGAAG CGCCTATCGT TCTAATTGAT
AAAATCAATA TAGAACTTGA AAGCATTATT AAGGAGGAAG CCTATAAAGG ACGCATCGTG
CTAAATGCGC ACCCTTTTAT AGCTGCTTAT TTAACCAAAG GGCTCTTTAG CTCTATCCGT
TTCAAGTGGT TCTTGAAATA CAAGCGATGG ATAAAAATCC TACCGCGCGA TGCCTATACT
TATTTAGAGT ATCGCTTCAA AACCAACGAA GGAACCCCTC TTTAA
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| Protein sequence | MDKELIIRSG SSYVDFALLR DGRLIELHKE EDTNGLGVGD IMLAKVRKPI QGLNAAFVNV
GHEKDAFLHY HDLGPQLASL LKFLKWVISG KLKDFSLKDF PLEPDIDKNG SVAETLKPNQ
PILVQIVKEP ISTKGPRISS ELSIAGRYLV LVPFSDRISI SQKIEGKAEK ERLRKLLQGI
KPKGFGVIVR TVAEGKKVAE LDKDLQSLFN RWVLMCRKIQ KAVFPSKVMS EVNKTGAILR
DMFNDSFTGI HVDNEQLYEQ IKKYVQEIAP EKENIVKLYH SSVPIFEKFH IERQIKTAFG
RTVSMPKGAY LVIEHTEALH VIDVNSGNHS NKNNDQETTA LSVNLIAATE IARQLRLRDM
GGIIVVDFID MGNSENRRVL FDHLRNEMAE DRAKHKILPP SKFGLIQITR QRVRQELNIK
TKEENPSKEG EIEAPIVLID KINIELESII KEEAYKGRIV LNAHPFIAAY LTKGLFSSIR
FKWFLKYKRW IKILPRDAYT YLEYRFKTNE GTPL
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