| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1476 |
|---|
| Symbol | |
|---|
| ID | 8367913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1749143 |
|---|
| End bp | 1750531 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644983909 |
|---|
| Product | PSP1 domain protein |
|---|
| Protein accession | YP_003141583 |
|---|
| Protein GI | 256820304 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1774] Uncharacterized homolog of PSP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.71704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGCA ATAGTTGCAC AATCAATCAT ACAAAAAAAG GGTGTATATC CAACTGTCGA
GCCAGTAGCT TTGGGAGTGT AAAGCTCTCA GTGTTCGATT GGCTTGCTAA TACTCAATTA
GCTGGTGGAC AAGAGTTTTT CGACTGCGTG GAAGTACGTT TTAAAAACAG TCGGAAGGAA
TACTTCCGCA ATGTAGACAA GCTCCCTCTG CAAATAGGAG ATGTCGTGGC TACCGAAGCT
CCCTCAGGTC ACGATGTGGG GGTAGTAACG CTCACAGGTG AGTTGGTGCG TTCGCAAATG
AAGAAGCGAA AAATAGATTG GGAAGGCGAC TTGCCCCGCG TATACCGCAA AGCCAATCAG
CACGATATAG ATGTATGGCA ACAGTCACGT GCCAAAGAGA TTGAAGTACA AAAACAATCA
CGCGAGCTAG CTATTGCCTT AGGACTCGAA ATGAAAATCT CAGATGTCGA ATTTCAAGGG
GATGGCTCTA AGGCTACTTT CTATTATACA GCTGAAGGAC GCGTAGATTT CCGCCAACTC
ATTAAGGATA TGGCAAAAGC CTTTTCAGTG CGTATAGAAA TGCGCCAGAT AGGTTTCCGT
CAAGAGGTAG CTCGCTTGGG CGGTATAGGC TCTTGTGGAC GCGAATTGTG TTGCTCTACT
TGGCTTACCG ATTTTAGAAG TGTTTCTACT TCGGCTGCCC GCTATCAGCA ACTCTCTTTA
AATCCACAGA AATTAGCAGG GCAATGTGGT AAGCTAAAAT GTTGCTTGAA CTTTGAGCTC
GATACTTATT TAGATGCTCT GCAAGACTTC CCAAGAACCG ATACAAAACT CCATACACAA
CGCGGTATGG CTACTTGTCA AAAGATAGAC ATCTTTAAGC GATTAATGTG GTTCACTTAT
GATGAAAACC CTATTACTTG GCACAAACTA TCTGTAGATA GTGTAAAAGA AATCTTAGAA
ATCAATAAAA ACGGCGAACC TATCGAGGAA CTCGAAGAAT ACGCCATTAT AACCGATTTG
TCTTCTCGTA AGAGTACCTC AGTATACGAG GGCATTGAAC TCGCTCCGGT AGAAGAAGAT
AGCATCACCC GTTTCGATAC TCCTAAGCGT AAAAAGAACA AACGCAACAA TAAAGGAGGT
CAAAAGAATG CTAAATCTGC TCAAAGTAAC AATAATAACT CCTCTAAACA ACTGAAATCA
CAGTCCAATC AAGGAGCTAA GAAAAACAAT AACAATGCAG AAGTAGCAAA CGAAAAACAA
GCTCAAAAGC CACAAGCGAA ACCTAAAAAT ACTCATTATA CCAATGGGAA TAACAAAAAG
AACCCTAATT ATAAAAACAA ACAAAAAGTT AATAATAACG ACAATACACC GAAAGATGAG
AATTCTTAG
|
|---|
| Protein sequence | MSCNSCTINH TKKGCISNCR ASSFGSVKLS VFDWLANTQL AGGQEFFDCV EVRFKNSRKE
YFRNVDKLPL QIGDVVATEA PSGHDVGVVT LTGELVRSQM KKRKIDWEGD LPRVYRKANQ
HDIDVWQQSR AKEIEVQKQS RELAIALGLE MKISDVEFQG DGSKATFYYT AEGRVDFRQL
IKDMAKAFSV RIEMRQIGFR QEVARLGGIG SCGRELCCST WLTDFRSVST SAARYQQLSL
NPQKLAGQCG KLKCCLNFEL DTYLDALQDF PRTDTKLHTQ RGMATCQKID IFKRLMWFTY
DENPITWHKL SVDSVKEILE INKNGEPIEE LEEYAIITDL SSRKSTSVYE GIELAPVEED
SITRFDTPKR KKNKRNNKGG QKNAKSAQSN NNNSSKQLKS QSNQGAKKNN NNAEVANEKQ
AQKPQAKPKN THYTNGNNKK NPNYKNKQKV NNNDNTPKDE NS
|
|---|
| |