Gene Coch_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1452 
Symbol 
ID8367889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1711793 
End bp1712455 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID644983885 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003141559 
Protein GI256820280 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.922957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA ACAAACTAAT TGACCACACG CTTCTAAAAG CAACGGCTAC CATTGCGGAT 
ATTGAGACCC TTTGCAAAGA AGCAGTGGAG TACGATTTTT ATTCGGTATG TGTGAATAGC 
TGTTATGTAA CAACAGCTAA GAAATTTTTA GCAGGCACTG ATATCAAGGT GTGTAGCGTG 
GTAGGCTTTC CCTTAGGAGC AATGTCGGCT AAAGCAAAAT ACTTTGAGAC GGGTGAAGCT 
CTCTCCGATG GTGCCGACGA GATTGATATG GTGCTAAACG TAGGCTTGTT AAAATCTGGT 
GAAGTGAACA AAGCGTTAGA CGAAATTATA TCGCTGAAAC GCTGTGTAGG TGAGAATAGA 
GTGCTAAAAG TAATCCTCGA AACCTGCTAC CTCACTGACG AAGAAAAACG CTTGGCTTGC 
CGTATGGCTC TTGATGCTAA AGCGGATTTT GTAAAGACCT CTACAGGATT TGGCTCAGGA 
GGGGCTACCC TTGCTGATGT GAAACTAATG AAAGAATGTG TGCAAGACAA GGCAAAAATA 
AAAGCCTCAG GAGGTATACG CGACTACGAA ACAGCTATGC AGTACGTGAA CTTAGGGGTA 
CAACGCATTG GCACATCGAA CGGTATTGCT ATCTTAAAAG GAGAAAAAGG AACGGGCTAC 
TAA
 
Protein sequence
MELNKLIDHT LLKATATIAD IETLCKEAVE YDFYSVCVNS CYVTTAKKFL AGTDIKVCSV 
VGFPLGAMSA KAKYFETGEA LSDGADEIDM VLNVGLLKSG EVNKALDEII SLKRCVGENR 
VLKVILETCY LTDEEKRLAC RMALDAKADF VKTSTGFGSG GATLADVKLM KECVQDKAKI 
KASGGIRDYE TAMQYVNLGV QRIGTSNGIA ILKGEKGTGY