Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1451 |
Symbol | |
ID | 8367888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1711029 |
End bp | 1711793 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644983884 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_003141558 |
Protein GI | 256820279 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.991336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA TCAGTTATAA CGTAAATGGC ATTAGGGCAG CGCTTACGAA AGGCTTTGCC GAGTGGCTGA AAAGCGCTAA CCCCGATGTG TTGTGCTTAC AAGAGATTAA AGCCACAGAA GACCAAATCC CTACGGAAGT TTTTTCGGAA TTGGGCTATA AATATCAGTA TTACCACAGT GCAGAGAAGA AAGGTTATAG TGGCGTAGCG ATACTCTCTA AAATAGAACC TAAGCACGTG GAAATAGGTA CGGGTATCGA CTATATGGAT AAGGAAGGAC GGGTGCTTCG CGCCGATTTT GAGACGCTAT CAGTAATGAG TCTGTACTTG CCCTCAGGTA CAAACCCTGA CCGCCTTGAC TTCAAACTGA CTTTTATGGC TGACTTTAAA AAGTACATAG ACAAACTGAA ACAGAAGGTG CCTAACCTCG TTATTTGTGG CGACTATAAC ATCTGTCACG AGGCGATAGA CATTCACGAC CCCATACGAA ATGCCAATGT ATCGGGCTTT CTTCCGATAG AACGCGAGTG GTTGGATAAG TTTATGAAGA GTGGTTTTAT TGATAGTTTT CGCTATTTCC ACAAAGAAGC ACATCAGTAC TCGTGGTGGA GCTATCGCGC GAATGCTCGC AACAATAACA AGGGTTGGCG CATCGATTAT CACTTGGTAT CTGCTCCCTT AGAAAACCGT ATGGAGCGCG CACTTATTCT CCCCGAGGCT AAACATAGCG ACCACTGCCC TATCTTATTA ATGGTTAATG ATTAG
|
Protein sequence | MKIISYNVNG IRAALTKGFA EWLKSANPDV LCLQEIKATE DQIPTEVFSE LGYKYQYYHS AEKKGYSGVA ILSKIEPKHV EIGTGIDYMD KEGRVLRADF ETLSVMSLYL PSGTNPDRLD FKLTFMADFK KYIDKLKQKV PNLVICGDYN ICHEAIDIHD PIRNANVSGF LPIEREWLDK FMKSGFIDSF RYFHKEAHQY SWWSYRANAR NNNKGWRIDY HLVSAPLENR MERALILPEA KHSDHCPILL MVND
|
| |