Gene Coch_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1451 
Symbol 
ID8367888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1711029 
End bp1711793 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content44% 
IMG OID644983884 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003141558 
Protein GI256820279 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.991336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TCAGTTATAA CGTAAATGGC ATTAGGGCAG CGCTTACGAA AGGCTTTGCC 
GAGTGGCTGA AAAGCGCTAA CCCCGATGTG TTGTGCTTAC AAGAGATTAA AGCCACAGAA
GACCAAATCC CTACGGAAGT TTTTTCGGAA TTGGGCTATA AATATCAGTA TTACCACAGT
GCAGAGAAGA AAGGTTATAG TGGCGTAGCG ATACTCTCTA AAATAGAACC TAAGCACGTG
GAAATAGGTA CGGGTATCGA CTATATGGAT AAGGAAGGAC GGGTGCTTCG CGCCGATTTT
GAGACGCTAT CAGTAATGAG TCTGTACTTG CCCTCAGGTA CAAACCCTGA CCGCCTTGAC
TTCAAACTGA CTTTTATGGC TGACTTTAAA AAGTACATAG ACAAACTGAA ACAGAAGGTG
CCTAACCTCG TTATTTGTGG CGACTATAAC ATCTGTCACG AGGCGATAGA CATTCACGAC
CCCATACGAA ATGCCAATGT ATCGGGCTTT CTTCCGATAG AACGCGAGTG GTTGGATAAG
TTTATGAAGA GTGGTTTTAT TGATAGTTTT CGCTATTTCC ACAAAGAAGC ACATCAGTAC
TCGTGGTGGA GCTATCGCGC GAATGCTCGC AACAATAACA AGGGTTGGCG CATCGATTAT
CACTTGGTAT CTGCTCCCTT AGAAAACCGT ATGGAGCGCG CACTTATTCT CCCCGAGGCT
AAACATAGCG ACCACTGCCC TATCTTATTA ATGGTTAATG ATTAG
 
Protein sequence
MKIISYNVNG IRAALTKGFA EWLKSANPDV LCLQEIKATE DQIPTEVFSE LGYKYQYYHS 
AEKKGYSGVA ILSKIEPKHV EIGTGIDYMD KEGRVLRADF ETLSVMSLYL PSGTNPDRLD
FKLTFMADFK KYIDKLKQKV PNLVICGDYN ICHEAIDIHD PIRNANVSGF LPIEREWLDK
FMKSGFIDSF RYFHKEAHQY SWWSYRANAR NNNKGWRIDY HLVSAPLENR MERALILPEA
KHSDHCPILL MVND