| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1419 |
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| Symbol | |
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| ID | 8367851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1661649 |
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| End bp | 1662872 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983847 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_003141526 |
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| Protein GI | 256820247 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.366401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTGC TACATACTGC CGATTGGCAC TTAGGACAAA CGTTTTACCA ATACGACCGC
TATAACGAAC ATCAATATTT CTTAGATAAT CTTTTGCAAA TTATTGAAGA ACAACATACT
GATGTTTTAC TTATCAGTGG TGATGTGTTT GATACTGCTA ACCCTGCAGT GGCATCGGTA
AAGCAGTTTT ATCATTTTCT TCATCAAGCA ACTGAGCGTT TCCCCCAACT GCAAATTATA
GCTATTGCGG GTAATCACGA TTCGCCTGTA CGCCTTGAAA TGCCCCAACC ACTCTTGGAA
GATACACAAG TGCATTTGGT GGGATATGTG AAAAGAAATG AACAGAGAGA GATAGATTAC
AAACGTCTTA TTATTCCGCT TTACGAAAGA GGGGAAGTAA TGGCTTACTG CCTTGCTGTG
CCTTTTCTCC GCTTAGGGGA TACTCCTAAA AATGAAGATA CTAACCCCGA TTATACTCAA
GGGGTGGAGG CTTTCTACCG CGAAATTACG GAAAAGGCTT TAGCCATTGC CAAAGGAAAA
CCGCTGATTG CTATGGGACA TCTGCACGCT TTGGGAGCAG AACTCAGCGA TGAGGACACG
GCTGAGCGTC CTATTATTGG GGGAATGGAA GGCTTCAAAC CAACGAGCTT TCCTAACGTG
TTACAATACA TTGCTTTGGG ACATATTCAC AAAGCTCAAA CCTTAGGTGG TAAAGCTCAT
ATACGCTACT CGGGAAGTCC TATACCCTTA TCATTTTCAG AAAAGGATTA TCAGCATCAA
GTGGTGGCTT TTTCATTAGA AGAAGGACGT GTACAGGATA TTAAAACGGT GCCTATTCCG
TTGCATACTC CTATGTTAAG CGTGCCTGAA CGACCACTAC CGGTTAAAGA AGTACTGAAT
GCTTTGGCTT CTTTGCCTAA GGGAACTACT CATACTCCTG CTCCTTATTT AGAAGTAAAA
GTATTACTAA ACGAACCTGC TCCTGAACTC AAAAACAGCA TACTGAAAGC TATCGCTCAT
AAACACGTAC GCTTGGCGCG TATAGATGTG CGCTACCAAC AGCAACAAAA CACTAAAAAG
GAAACTTTGC AAAAGGAAAT TACTTTAAAC GACCTGCAAC CTTATGAGGT ACTACAAAGG
GTTTACCAAA ATAAATTCCA AAAAGAACTG CCTGAATTCT ATAAACCTTT GTTTGATGAA
GCAATGGAGA AAGCGACTGA TTAA
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| Protein sequence | MNLLHTADWH LGQTFYQYDR YNEHQYFLDN LLQIIEEQHT DVLLISGDVF DTANPAVASV
KQFYHFLHQA TERFPQLQII AIAGNHDSPV RLEMPQPLLE DTQVHLVGYV KRNEQREIDY
KRLIIPLYER GEVMAYCLAV PFLRLGDTPK NEDTNPDYTQ GVEAFYREIT EKALAIAKGK
PLIAMGHLHA LGAELSDEDT AERPIIGGME GFKPTSFPNV LQYIALGHIH KAQTLGGKAH
IRYSGSPIPL SFSEKDYQHQ VVAFSLEEGR VQDIKTVPIP LHTPMLSVPE RPLPVKEVLN
ALASLPKGTT HTPAPYLEVK VLLNEPAPEL KNSILKAIAH KHVRLARIDV RYQQQQNTKK
ETLQKEITLN DLQPYEVLQR VYQNKFQKEL PEFYKPLFDE AMEKATD
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