| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1414 |
|---|
| Symbol | |
|---|
| ID | 8367846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1654410 |
|---|
| End bp | 1654919 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644983842 |
|---|
| Product | transferase hexapeptide repeat containing protein |
|---|
| Protein accession | YP_003141521 |
|---|
| Protein GI | 256820242 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000109876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTCA AGAAAGTTAA CGGAAAGCAA CCTACCTTTG GGGAAGGTTG CTTTTTTGCT
GAAAATGCTA CCCTTACCGG TGATGTGCAC TTAGGCGACC ACTGTACCGT GTGGTATAAT
GCGGTTATTC GTGGCGATGT AAACACTATT TGCATAGGTG ATGACACCAA TATCCAAGAT
GGTGTAGTGA TTCACGCTAC CTATCAAACA CACCCCACAA CCATTGGCAA TCGCGTCTCC
ATAGGGCATA ACGCTATCGT ACACGGCTGT ACTATCGAAG ATGATGTGCT TATAGGTATG
GGAAGCATCG TAATGGACGG ATGTGTGGTA GAAAGCCATA GCATTGTAGC TGCTGGAGCC
GTAGTACCTC CTAATACCCA TATAGAAAAA GGGAGCCTCT ATGCTGGCGT TCCTGCTAAA
AAACTCAAAA ATATTACCGA TGAACAGAGG ACTCTCATCG AGCGAACTGC CCTAAACTAT
CCTAAATATG CAAGTTGGAT AGAAAAATAG
|
|---|
| Protein sequence | MLVKKVNGKQ PTFGEGCFFA ENATLTGDVH LGDHCTVWYN AVIRGDVNTI CIGDDTNIQD
GVVIHATYQT HPTTIGNRVS IGHNAIVHGC TIEDDVLIGM GSIVMDGCVV ESHSIVAAGA
VVPPNTHIEK GSLYAGVPAK KLKNITDEQR TLIERTALNY PKYASWIEK
|
|---|
| |