Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1406 |
Symbol | |
ID | 8367838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1648247 |
End bp | 1649083 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983834 |
Product | rod shape-determining protein MreC |
Protein accession | YP_003141513 |
Protein GI | 256820234 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.27011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAA TCATTCAATT CTTTATGAGG TCGAGGGATT TTTTTGTGTT CCTCGCACTG TTCTTATGCG CTATTGGTTT GGTTTTTAAC AGCAATTATT ATCCTCAGAG TGCTTATATA AACTCAGCGA ATGCAGTGTC GGGTAGGCTT TACAGTTTCA CAGACTATTG GGCACAATAT TTTAGCTTAC GCGGTCAGAA CGAAACCCTT ACTGAGGAGA ATAGAGCTCT GCGCTCACAA CTGTTACGGA TGGAACAACA AATCCGCAAT ATATCTCTTG TAGATTCGGT GTCATTTCCC ACTACCGATT CACTGAAATA CAAGGTACTT AAAGCAAATG TGATAAAAAA TAGTTTCCGT TTAAAAAACA ACTACCTCAC TATCGACAAA GGTACGAAAG ACGGTGTAAA GCAAGATATG GGAGTACTTT CGCCACAAGG AGTTGTAGGA ATAATAGAGA ATACTTCGGA GAGGTTTGCT ACTGTACAAA GCGTACTGAA TACTAGGTCG GCACTGAATG CAATGGTGAA GCGCACACAA CACTTTGGTT CATTGCGTTG GGATACCAGA GAAGTGAATA AAGTACAGCT GTTAGAAGTA CCTAATATAG CCCCTATACA GAATGGAGAT ACGATTGTAA CAGGGGGTAT GTCGAACATA TTCCCTAAGG GAATTCCTAT TGGCAGGATA GTTCATTTTG AAAAGAGCAA AAAGGATAAT ACGTATATCA TTGATGTAAA ACTATTTGCT GATATGTCGA ACCTTGAATA TGTATATATT ATTGAAGATA GAGATAGAGC AGCCGTTTCT GAATTAGAAA AACAGAACCC AAAATGA
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Protein sequence | MNQIIQFFMR SRDFFVFLAL FLCAIGLVFN SNYYPQSAYI NSANAVSGRL YSFTDYWAQY FSLRGQNETL TEENRALRSQ LLRMEQQIRN ISLVDSVSFP TTDSLKYKVL KANVIKNSFR LKNNYLTIDK GTKDGVKQDM GVLSPQGVVG IIENTSERFA TVQSVLNTRS ALNAMVKRTQ HFGSLRWDTR EVNKVQLLEV PNIAPIQNGD TIVTGGMSNI FPKGIPIGRI VHFEKSKKDN TYIIDVKLFA DMSNLEYVYI IEDRDRAAVS ELEKQNPK
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