| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1354 |
|---|
| Symbol | |
|---|
| ID | 8367785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1592281 |
|---|
| End bp | 1593222 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644983781 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_003141461 |
|---|
| Protein GI | 256820182 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA TTGAAAAGAT AAAATGCCTA ATTATAGGCT CAGGTCCTGC GGGCTATACT
GCCGCTATTT ACGCTTCGCG CGCGAACCTA AGCCCTGTGC TTTACCAAGG AGAACAACCT
GGTGGACAGC TCACTACTAC TAACGAAGTA GAGAATTTTC CGGGATATCC TGAGGGAGTA
ATGGGTAGCG AAATGATGAT ACAGTTAGAG CAACAAGCTA AACGCTTTGG GGCTGATATT
CGCAACGGCT GGGTGACTAA GGTAGATTTT TCGGCTCACC CACACAAAGT ATGGGTAGAT
GACCAAGAGC TCCACGCTGA TGCCGTGATT ATCGCTACGG GTGCTTCGGC TAAATACTTA
GGTTTACCCT CAGAACAGCA CTATTTGCAA ACAGGAGGAG GCGTATCGGC TTGTGCTGTG
TGCGACGGTT TTTTCTACCG CAATCAACAC GTGGCTATTG TAGGGGCAGG CGACTCGGCT
TGTGAGGAAG CGCTTTACTT AGCGAATCTT TGCTCGAAAG TAACAATGTT CGTGCGTCGC
GATGAGTTCC GCGCTTCACA AATTATGAAG GAACGCGTGC TCAATTCGCC AAAAATAGAA
GTGCTTTTCA ATACCGAAAC TGAAGAAATT CTCGGTGACG GACAAGTAGT TACGGGCATT
AAAGTGCGCA ACAACAAGAC AGGGGAGATA AGCGAAATAG CTATCACAGG TTTCTTTGTA
GCTATCGGTC ACAAACCTAA TACTGATGTG TTTAAACCTT ATATCGACAC TGATGAGGTG
GGCTATATTA AAAATGTAGC GGGCACTTCG CTCACCAATG TAGCAGGGGT GTTTGTAGCT
GGTGATGCTG CCGACACGCG CTACCGCCAA GCTATTACGG CAGCAGGCTC GGGCTGTATG
GCAGCGTTGG ACGCAGAGAA ATACCTTCTT ACTCTTGAAT AG
|
|---|
| Protein sequence | MANIEKIKCL IIGSGPAGYT AAIYASRANL SPVLYQGEQP GGQLTTTNEV ENFPGYPEGV
MGSEMMIQLE QQAKRFGADI RNGWVTKVDF SAHPHKVWVD DQELHADAVI IATGASAKYL
GLPSEQHYLQ TGGGVSACAV CDGFFYRNQH VAIVGAGDSA CEEALYLANL CSKVTMFVRR
DEFRASQIMK ERVLNSPKIE VLFNTETEEI LGDGQVVTGI KVRNNKTGEI SEIAITGFFV
AIGHKPNTDV FKPYIDTDEV GYIKNVAGTS LTNVAGVFVA GDAADTRYRQ AITAAGSGCM
AALDAEKYLL TLE
|
|---|
| |