Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1335 |
Symbol | |
ID | 8367766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1551316 |
End bp | 1552650 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644983762 |
Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
Protein accession | YP_003141442 |
Protein GI | 256820163 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TAGTAATATT AGGAGGTGGT GAAAGTGGTG TAGGAACTGC CATTCTCGGT AAACAAAAAG GCTGGGAAGT ATTCCTTTCC GATAAAGGTT CCCTAAAACC TCACTACCGC GAAACTCTTA ACAAAGAAGG CATTCAGTGG GAAGAAGGCA CACACACCGA AGAGAAAATT CTCTCAGCCG ATGTGATTAT GAAAAGCCCA GGTATCCCAG ATAAAGCACC TATCATCAAA AAAGCTCACG AAAAAGGCAT TGCTGTGATT TCTGAAATAG AATTTGCAAG CCAATATACC GATAGCCTCA TTGTAGGCAT CACAGGTAGT AATGGTAAAA CCACTACCAC CTTGCTCACT TATCACATTT TCAAAGAAGC GGGATTGCAA GTGGGACTTG GCGGAAACAT AGGTTATAGC TTCGCCGAAT TAGTAGCTAC CAAAAATCCA CCGTATTATG TACTCGAAAT CAGTAGTTTT CAGTTAGACG GCATAGAGCA TTTCGCCCCC CATATCGCCG TGTTGCTTAA CATAACTCCT GACCATCTCG ATAGGTACGA CTATAAGTTC GAAAACTATA TCGACTCTAA ATTCCGTATC GCGATGAACC AAACTGAAAA TGATTACCTT ATCTATGATG CCGACGACGA GGTAATTACA CAGTGGCTCA GCACCCATAC TATAAAATCT AAACTCATAC CTTTTTCTAT AGAGAAAGAA CTCCCACAAG GAGCTTTCTT AAAAGATAAT AAAATATACA TTATGTTAGA GAATCAAACT ACTGAAATCG ACGTTGAAGA AATTAGCCTT CGTGGCAAGC ACAACATTAA AAATACAATG GCAGCAAGTG TAGCTGCTCG CTTGGTAAAT ATCCGCAACA ACTCATTGCG CGAAAGTCTC AAAGGCTTTA AAGGTGCTCC CCACCGCCTC GAAGAGGTGA AAGTAGTAGA TGGCGTTACT TACGTAAACG ACTCTAAAGC TACTAACGTA AATTCAGTAT TCTACGCTCT CGACACCATT AAAACTCCTA TCGTGTGGAT AGTTGGCGGA CAAGACAAAG GCAACGACTA TAACTCTCTT TTACCTTATG TACACGAAAA AGTAAGAGCT ATTGTATGCC TCGGAGTCGA TAATACCCCT ATTATTCAAT CGTTTTACAA CACAATAGAC ACGCTTGTCG AAACTCGCTC AATGGACGAA GCCGTGAAAT TAGCACAAAG TTTTGCTCAA GAAGGCGATA CAGTACTATT ATCCCCCGCT TGCGCCAGCT TCGACCTCTT TAAAAACTAC GAAGAACGCG GAGACCTCTT TAAAGCAGCC GTTCAGAAAC TGTAA
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Protein sequence | MKRLVILGGG ESGVGTAILG KQKGWEVFLS DKGSLKPHYR ETLNKEGIQW EEGTHTEEKI LSADVIMKSP GIPDKAPIIK KAHEKGIAVI SEIEFASQYT DSLIVGITGS NGKTTTTLLT YHIFKEAGLQ VGLGGNIGYS FAELVATKNP PYYVLEISSF QLDGIEHFAP HIAVLLNITP DHLDRYDYKF ENYIDSKFRI AMNQTENDYL IYDADDEVIT QWLSTHTIKS KLIPFSIEKE LPQGAFLKDN KIYIMLENQT TEIDVEEISL RGKHNIKNTM AASVAARLVN IRNNSLRESL KGFKGAPHRL EEVKVVDGVT YVNDSKATNV NSVFYALDTI KTPIVWIVGG QDKGNDYNSL LPYVHEKVRA IVCLGVDNTP IIQSFYNTID TLVETRSMDE AVKLAQSFAQ EGDTVLLSPA CASFDLFKNY EERGDLFKAA VQKL
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