Gene Coch_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1258 
Symbol 
ID8367688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1463765 
End bp1464892 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content39% 
IMG OID644983687 
Productconserved hypothetical protein, secreted 
Protein accessionYP_003141367 
Protein GI256820088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTTT GCAAAAATAC TATTAAAATG AACTGCACTC GGTTATTTTG TTTCCTCTGT 
GTGTTTCTGT TTGCGAAAAC ACCCCTCTTT TGTCAAGAAG AAAAGTCTAT TTCTACCGCT
TTTCCGTTCT TAATTCTTAA TTCTGATGCT ATATCAGCAG GAAAAGGAGA AGTAGGGGTA
GCTTCCTCTC CCGATGTATT TTCTCAAAGA GTGAATGCTT CCAAATATAT CTTTCTACCT
ACTTCTTCAG CAGTAGCCAT TAATTATATG CCCTTCACCC ATAGAGCTGT GCGCGATGTG
TTTTTAGGGG GGATTACTTT TTACAAAAAG AGAATACGCG ATGCTTTCGG AGCAAATTTC
TCATATTTCA GTATCGGTGA TGTGAACTTA ACCCAAGACA TAGGGCAACA ATCATATATG
TTAGGCACTT TCAAGCCTAC TGAGCTTTCA TTGGAGGGCT CTTATAGTTT GCAATTAAGT
CAATCGTTCG CAATGGGGGT TACCTCTCGT TTTTTAAGCT CACAACTATC TATTCCTTCG
CAAGGGAAGA GTGTTGCCCG AGCATTAGCT TTTGATATAG CAGGCTATTT CTATTCACAA
GAACACTTTA TTAGTAGTTT GTTATACCGA TACACTTGGG GATTCCAACT TTCTAATGTA
GGAACAAAGG TGAAGTACGA CGACTTGGGC AGGTCTTTCT ATCTTCCCAC CCAACTGAAA
TTAGGAGCAG GTTTTTTATT GCAAACCGAT AGTTATAACG AGTGGGAACT CTCGATAGAA
GCACAGAAAT ACCTTGTGCC TACCCCTAAT GAGCAAGGTG TCCCCGACAA AGATATTATA
GAAGCCTTAA TAACCTCTTT CTACGATGCT CCTAATGGTT TTCGTGAAGA GTTTCACGAG
ATTAATTGGG CAATAGGTTT AGAATACAAG TATAACCAAT CGTTTTTCTT GCGCTCAGGG
TTCTTCTACC AACACAAGGA CAAAGGCGAC CGAAAGTTCC TATCCATAGG AGCAGGGTTT
GCCTTTAACA ATTGGCAAAT GGATGTAGCC TATCCTTTTT CATTTTCTAC TTATAAAAAC
CCATTTCATA CCTTTAAACT TAATCTCATT TATCGCTTTG GACAGTAG
 
Protein sequence
MYLCKNTIKM NCTRLFCFLC VFLFAKTPLF CQEEKSISTA FPFLILNSDA ISAGKGEVGV 
ASSPDVFSQR VNASKYIFLP TSSAVAINYM PFTHRAVRDV FLGGITFYKK RIRDAFGANF
SYFSIGDVNL TQDIGQQSYM LGTFKPTELS LEGSYSLQLS QSFAMGVTSR FLSSQLSIPS
QGKSVARALA FDIAGYFYSQ EHFISSLLYR YTWGFQLSNV GTKVKYDDLG RSFYLPTQLK
LGAGFLLQTD SYNEWELSIE AQKYLVPTPN EQGVPDKDII EALITSFYDA PNGFREEFHE
INWAIGLEYK YNQSFFLRSG FFYQHKDKGD RKFLSIGAGF AFNNWQMDVA YPFSFSTYKN
PFHTFKLNLI YRFGQ