Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1258 |
Symbol | |
ID | 8367688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1463765 |
End bp | 1464892 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983687 |
Product | conserved hypothetical protein, secreted |
Protein accession | YP_003141367 |
Protein GI | 256820088 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCTTT GCAAAAATAC TATTAAAATG AACTGCACTC GGTTATTTTG TTTCCTCTGT GTGTTTCTGT TTGCGAAAAC ACCCCTCTTT TGTCAAGAAG AAAAGTCTAT TTCTACCGCT TTTCCGTTCT TAATTCTTAA TTCTGATGCT ATATCAGCAG GAAAAGGAGA AGTAGGGGTA GCTTCCTCTC CCGATGTATT TTCTCAAAGA GTGAATGCTT CCAAATATAT CTTTCTACCT ACTTCTTCAG CAGTAGCCAT TAATTATATG CCCTTCACCC ATAGAGCTGT GCGCGATGTG TTTTTAGGGG GGATTACTTT TTACAAAAAG AGAATACGCG ATGCTTTCGG AGCAAATTTC TCATATTTCA GTATCGGTGA TGTGAACTTA ACCCAAGACA TAGGGCAACA ATCATATATG TTAGGCACTT TCAAGCCTAC TGAGCTTTCA TTGGAGGGCT CTTATAGTTT GCAATTAAGT CAATCGTTCG CAATGGGGGT TACCTCTCGT TTTTTAAGCT CACAACTATC TATTCCTTCG CAAGGGAAGA GTGTTGCCCG AGCATTAGCT TTTGATATAG CAGGCTATTT CTATTCACAA GAACACTTTA TTAGTAGTTT GTTATACCGA TACACTTGGG GATTCCAACT TTCTAATGTA GGAACAAAGG TGAAGTACGA CGACTTGGGC AGGTCTTTCT ATCTTCCCAC CCAACTGAAA TTAGGAGCAG GTTTTTTATT GCAAACCGAT AGTTATAACG AGTGGGAACT CTCGATAGAA GCACAGAAAT ACCTTGTGCC TACCCCTAAT GAGCAAGGTG TCCCCGACAA AGATATTATA GAAGCCTTAA TAACCTCTTT CTACGATGCT CCTAATGGTT TTCGTGAAGA GTTTCACGAG ATTAATTGGG CAATAGGTTT AGAATACAAG TATAACCAAT CGTTTTTCTT GCGCTCAGGG TTCTTCTACC AACACAAGGA CAAAGGCGAC CGAAAGTTCC TATCCATAGG AGCAGGGTTT GCCTTTAACA ATTGGCAAAT GGATGTAGCC TATCCTTTTT CATTTTCTAC TTATAAAAAC CCATTTCATA CCTTTAAACT TAATCTCATT TATCGCTTTG GACAGTAG
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Protein sequence | MYLCKNTIKM NCTRLFCFLC VFLFAKTPLF CQEEKSISTA FPFLILNSDA ISAGKGEVGV ASSPDVFSQR VNASKYIFLP TSSAVAINYM PFTHRAVRDV FLGGITFYKK RIRDAFGANF SYFSIGDVNL TQDIGQQSYM LGTFKPTELS LEGSYSLQLS QSFAMGVTSR FLSSQLSIPS QGKSVARALA FDIAGYFYSQ EHFISSLLYR YTWGFQLSNV GTKVKYDDLG RSFYLPTQLK LGAGFLLQTD SYNEWELSIE AQKYLVPTPN EQGVPDKDII EALITSFYDA PNGFREEFHE INWAIGLEYK YNQSFFLRSG FFYQHKDKGD RKFLSIGAGF AFNNWQMDVA YPFSFSTYKN PFHTFKLNLI YRFGQ
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