Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1243 |
Symbol | |
ID | 8367672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1452090 |
End bp | 1453334 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644983673 |
Product | conserved hypothetical protein, secreted |
Protein accession | YP_003141354 |
Protein GI | 256820075 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2382] Enterochelin esterase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.180879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT ATCTTACAAT CGTTATCGCT TTGGTAACCT TACAAAGTGC GTTTTCACAG GTTATTTCGG AGACTTTTTC GTCAGGGAGA CTCAATAGAA AACAGAAGAT AGGTATCTAC AAGCCTGAAA AGTACACGGA TAGACAGGCA TATCCGCTGA TAGTAGTGCT CAATGCGGAA ACGCTGATGG AACCTGTTGT TTCGATGGTG CGTTATTACG AACAGTTTGG TGAAATGCCT AAGTGTATAG TGGTGGGTGT GTATGAACCC AAACAAGAAG ATGTAACGGT GGTAGAAGAG GTGGGTCGCC CTATTAATGA GTCGGCTCGT TTCTTTGAGT TTGTATCGGC AGAATTGGTG CCTTACATAC AAGGGAAATA CCCAATAGCT GACCTAAAAG GGGTTATTGC TTCGGAAGAG GCGGGTTTTT TGGCTAATTA CTATATGCTT GCCGAGAAGA AACCTACTTT TAATATGATA GTAAGCCTTA ATCCAGTGGC TCTTCCACGT ATGGGAGAAG AGTTTTCGCA CGCTTTGGCA GCGGGAGTGC CTAACCGTTT ATTTTACTAT ATGGCTACTG CCGATGTGGA AAACAAAGTA GTGTACGACA AGGCAATTCA GTTTGAAAGA GCGATGCGCT CAGCGCCTGT GCACGAATCG GTAGAATATC ACTTTGTTGA TTTTAAAGGA AGCTCAGTAA ACGCTGCTAA ATTGCAGGGG ATAGCACAGG CACTTGATAT GTGTTTTGAC ATTTATAAAC CCATAGGAGG CAAGGAGTTT AAGACCCAAA TGGAGACTCT TGAAACCGGG ATTTATGAAT ATTTGGAGAA CAAATATAAC ACTATTTATA AACAGTTAGG CGTAAAGAAA GTGCCTATAC TAAACGATGT GATGGCTACT TATACAGCTA TTAATTCGTC GCAAGACTGG GAATCGCTTA AGAAATTAGC GAAATACGTA GAGAGCAATG GCTACCTAAA AACTGCTATG CCCAATTTCT TTTTAGCTGA ATATTACGAA AAAATAGGCG ACGATAAAAA GGCACTGAAA ACGTATCAGA AAGCGTATAC TGAGCCTAAT ATAGATTTCA TCACAGGAGA CTTGATAAAT GAACGTATCA CGCATTTGCA AGCTACCAAA CGCAAGAGTA AACACACAAA AGTAATAGAA CCCATAGAAC CAACAGAAGA AGTGGCACCT GCACAAGAAG AACAAAATCC TACCGATGAA AGTAATCAGA ACTAA
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Protein sequence | MKKYLTIVIA LVTLQSAFSQ VISETFSSGR LNRKQKIGIY KPEKYTDRQA YPLIVVLNAE TLMEPVVSMV RYYEQFGEMP KCIVVGVYEP KQEDVTVVEE VGRPINESAR FFEFVSAELV PYIQGKYPIA DLKGVIASEE AGFLANYYML AEKKPTFNMI VSLNPVALPR MGEEFSHALA AGVPNRLFYY MATADVENKV VYDKAIQFER AMRSAPVHES VEYHFVDFKG SSVNAAKLQG IAQALDMCFD IYKPIGGKEF KTQMETLETG IYEYLENKYN TIYKQLGVKK VPILNDVMAT YTAINSSQDW ESLKKLAKYV ESNGYLKTAM PNFFLAEYYE KIGDDKKALK TYQKAYTEPN IDFITGDLIN ERITHLQATK RKSKHTKVIE PIEPTEEVAP AQEEQNPTDE SNQN
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