Gene Coch_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1243 
Symbol 
ID8367672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1452090 
End bp1453334 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content41% 
IMG OID644983673 
Productconserved hypothetical protein, secreted 
Protein accessionYP_003141354 
Protein GI256820075 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2382] Enterochelin esterase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.180879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT ATCTTACAAT CGTTATCGCT TTGGTAACCT TACAAAGTGC GTTTTCACAG 
GTTATTTCGG AGACTTTTTC GTCAGGGAGA CTCAATAGAA AACAGAAGAT AGGTATCTAC
AAGCCTGAAA AGTACACGGA TAGACAGGCA TATCCGCTGA TAGTAGTGCT CAATGCGGAA
ACGCTGATGG AACCTGTTGT TTCGATGGTG CGTTATTACG AACAGTTTGG TGAAATGCCT
AAGTGTATAG TGGTGGGTGT GTATGAACCC AAACAAGAAG ATGTAACGGT GGTAGAAGAG
GTGGGTCGCC CTATTAATGA GTCGGCTCGT TTCTTTGAGT TTGTATCGGC AGAATTGGTG
CCTTACATAC AAGGGAAATA CCCAATAGCT GACCTAAAAG GGGTTATTGC TTCGGAAGAG
GCGGGTTTTT TGGCTAATTA CTATATGCTT GCCGAGAAGA AACCTACTTT TAATATGATA
GTAAGCCTTA ATCCAGTGGC TCTTCCACGT ATGGGAGAAG AGTTTTCGCA CGCTTTGGCA
GCGGGAGTGC CTAACCGTTT ATTTTACTAT ATGGCTACTG CCGATGTGGA AAACAAAGTA
GTGTACGACA AGGCAATTCA GTTTGAAAGA GCGATGCGCT CAGCGCCTGT GCACGAATCG
GTAGAATATC ACTTTGTTGA TTTTAAAGGA AGCTCAGTAA ACGCTGCTAA ATTGCAGGGG
ATAGCACAGG CACTTGATAT GTGTTTTGAC ATTTATAAAC CCATAGGAGG CAAGGAGTTT
AAGACCCAAA TGGAGACTCT TGAAACCGGG ATTTATGAAT ATTTGGAGAA CAAATATAAC
ACTATTTATA AACAGTTAGG CGTAAAGAAA GTGCCTATAC TAAACGATGT GATGGCTACT
TATACAGCTA TTAATTCGTC GCAAGACTGG GAATCGCTTA AGAAATTAGC GAAATACGTA
GAGAGCAATG GCTACCTAAA AACTGCTATG CCCAATTTCT TTTTAGCTGA ATATTACGAA
AAAATAGGCG ACGATAAAAA GGCACTGAAA ACGTATCAGA AAGCGTATAC TGAGCCTAAT
ATAGATTTCA TCACAGGAGA CTTGATAAAT GAACGTATCA CGCATTTGCA AGCTACCAAA
CGCAAGAGTA AACACACAAA AGTAATAGAA CCCATAGAAC CAACAGAAGA AGTGGCACCT
GCACAAGAAG AACAAAATCC TACCGATGAA AGTAATCAGA ACTAA
 
Protein sequence
MKKYLTIVIA LVTLQSAFSQ VISETFSSGR LNRKQKIGIY KPEKYTDRQA YPLIVVLNAE 
TLMEPVVSMV RYYEQFGEMP KCIVVGVYEP KQEDVTVVEE VGRPINESAR FFEFVSAELV
PYIQGKYPIA DLKGVIASEE AGFLANYYML AEKKPTFNMI VSLNPVALPR MGEEFSHALA
AGVPNRLFYY MATADVENKV VYDKAIQFER AMRSAPVHES VEYHFVDFKG SSVNAAKLQG
IAQALDMCFD IYKPIGGKEF KTQMETLETG IYEYLENKYN TIYKQLGVKK VPILNDVMAT
YTAINSSQDW ESLKKLAKYV ESNGYLKTAM PNFFLAEYYE KIGDDKKALK TYQKAYTEPN
IDFITGDLIN ERITHLQATK RKSKHTKVIE PIEPTEEVAP AQEEQNPTDE SNQN