Gene Coch_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1236 
Symbol 
ID8367665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1443319 
End bp1444059 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID644983666 
ProductFeS assembly ATPase SufC 
Protein accessionYP_003141347 
Protein GI256820068 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATAA TAAAAAATCT CCACGCAGGT GTGGACGGCA AAGAAATCCT TAAAGGGATT 
GACTTAGAAA TAAAAGCAGG CGAAGTACAC GCTATTATGG GACCTAATGG AGCAGGCAAA
TCTACCCTTT CGGCGGTGAT TGCGGGTAAC GAAAACTTTG AGGTAACAGA GGGTGATATC
CTCCTCAATG GCGAAAGTCT GTTAGAAGAT GCCCCCGAAG AGCGCGCACA TAAAGGTATC
TTTATGTCTT TCCAATACCC TGTAGAAATT CCTGGAATAT CAGTAACCAA CTTCATCAAA
ACTGCTATTA ACGAGAGTCG CAAGGCACAA GGATTACCCG ATATGCCTGC TGCTGAACTC
CTCAAAAAAA TACGCGAAAA AGCAACCCTT CTAGAAATCA ATCCTGACTT CCTTTCGCGT
TCCCTCAACC AAGGATTCTC TGGCGGTGAG AAGAAACGCA ACGAAATCTT CCAAATGGCA
ATGCTCGAAC CTAAAATTGC TATTCTAGAC GAGACCGACT CTGGTCTTGA TATCGACGCC
CTACGCATTG TAGCTAATGG GGTGAATAAA CTCAAAAGCA AAGACAACGC TGTGCTTGTT
ATCACCCACT ACCAACGCCT TTTAGACTAC ATCGTCCCCG ATTACGTACA CGTACTTTCC
GACGGTAAAA TCGTAAAAAC AGGCGACAAA ACCCTCGCCT TAGAATTGGA AGCAAAAGGT
TATGATTGGC TGAAAGGATA A
 
Protein sequence
MLIIKNLHAG VDGKEILKGI DLEIKAGEVH AIMGPNGAGK STLSAVIAGN ENFEVTEGDI 
LLNGESLLED APEERAHKGI FMSFQYPVEI PGISVTNFIK TAINESRKAQ GLPDMPAAEL
LKKIREKATL LEINPDFLSR SLNQGFSGGE KKRNEIFQMA MLEPKIAILD ETDSGLDIDA
LRIVANGVNK LKSKDNAVLV ITHYQRLLDY IVPDYVHVLS DGKIVKTGDK TLALELEAKG
YDWLKG