Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1233 |
Symbol | |
ID | 8367662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1440820 |
End bp | 1441629 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644983663 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003141344 |
Protein GI | 256820065 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCC TAATATCTAA ACAAATGGAA CTAAATCGTA TCAAAGGAAA AATCGCTTTT ATCTCGGGTG CCAGTAGTGG GATAGGTAAA GCGGTAGCCG AAAAGTTGGC ACAAATGGGC GTTAATTTGA TTCTCTGCGC TCGTCGGGCT GAGGTATTGG CAGAACTGAA AGCAAAACTC GAAAAAGAAC ACGCTGTGGA GGTTATAACC TTAGCTTTCG ACGTGAGAAA CTATCAAGAG GTTGCGAAAA ATATCCAGTC CTTACCCGAA AAATGGCGAC AAATAGATAT ACTCATCAAC AATGCGGGCT TGGCAATAGG ATTGCAACAC CTCTATACTT ACGCCATAGA AGATATAGAC CAGATGATTG ACACCAACAT CAAAGGGTTT ACCTATATTG CCAACAGTGT GATTCCGCTA ATGATTGCCA CCGACAAGGT GGGAACGATT GTGAACGTCG GGTCGGTAGC GGGTGAGATA GCTTACCCCA ATGGCAGTAT TTATTGTGCG ACCAAGTTTG CTGTAAAAGC CCTAAGCGAT GCGATGCGTA TAGAGCTAAT GGACAAGAAG CTGAAGGTAA CGACCGTAAA ACCAGGGTTG GTAGAGACCA ATTTCAGCAA GGTGCGTTTC AAAGGCGATG AGCAGAAAGC TGAGAACGTG TATAAGGGTA TCACGCCCCT ATATGCCGAA GATATAGCCG ACACCATAAC CTATATCGTC AATCTGCCAG ATAAAGTTCA AATCACCGAT ATTACTGTTA CCCCGCTCCA CCAATCGGAT GCAATACACG TGTATAAATT AGCAAATTAG
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Protein sequence | MNTLISKQME LNRIKGKIAF ISGASSGIGK AVAEKLAQMG VNLILCARRA EVLAELKAKL EKEHAVEVIT LAFDVRNYQE VAKNIQSLPE KWRQIDILIN NAGLAIGLQH LYTYAIEDID QMIDTNIKGF TYIANSVIPL MIATDKVGTI VNVGSVAGEI AYPNGSIYCA TKFAVKALSD AMRIELMDKK LKVTTVKPGL VETNFSKVRF KGDEQKAENV YKGITPLYAE DIADTITYIV NLPDKVQITD ITVTPLHQSD AIHVYKLAN
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