| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1170 |
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| Symbol | rpsM |
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| ID | 8367592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1382112 |
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| End bp | 1382486 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644983596 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_003141284 |
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| Protein GI | 256820005 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.716485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGAA TTGCAGGTAT TGACTTACCA AAAAACAAAA GAGGGGTTAT TGGTTTAACC
TACATTTTTG GTATTGGAAA AAGTAGAGCT AAAGAAATCT TAAGTAGAGC TCAAGTAAAC
GAAGACACAA AAGTAAGCGA ATGGAATGAT GAGGAAATCA CTCGTATTCG CGAAGTGGTT
GCGTCTTATA AAATTGAAGG AGAATTGCGC TCCGAAATCC AATTGAACAT CAAACGTTTG
ATGGATATCG GTTGTTATCG CGGTATCCGC CATCGTAACG GATTGCCTTT GCGCGGACAA
AAAACTAAAA ACAATTCTCG TACAAGAAAA GGTAAAAGAA AAACTGTTGC GAACAAGAAG
AAAGCAACTA AATAA
|
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| Protein sequence | MARIAGIDLP KNKRGVIGLT YIFGIGKSRA KEILSRAQVN EDTKVSEWND EEITRIREVV
ASYKIEGELR SEIQLNIKRL MDIGCYRGIR HRNGLPLRGQ KTKNNSRTRK GKRKTVANKK
KATK
|
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