| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1167 |
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| Symbol | secY |
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| ID | 8367589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1380152 |
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| End bp | 1381495 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983593 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_003141281 |
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| Protein GI | 256820002 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.221673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT TTATCGAGAA CCTGACCAAT ATTTGGAAAA TTGAAGAGTT AAAAAATAGA
ATCATTTTAA CTCTCGGAAT TTTGTTAGTT TATCGCTTTG GAGCTCACAT CGTCCTCCCT
GGTATCGACT CCGCTCAACT CCACGAGTTA GCAACAAAAA CATCAGGCGG CGGATTGCTC
GACATCCTCA ATGCCTTTAC AGGGGGCGCT TTCTCTAACG CCTCAGTATT CGCACTCGGG
ATTATGCCCT ACATCTCAGC TTCTATCGTA GTTCAGTTGA TGGGAATCGC TATCCCTTAT
CTCCAAAAAC TACAAAAAGA AGGTGAAAGC GGACGAAGAA AGATAAACCA AATCACTCGA
TGGCTTACTA TTGCAATATG TATTGTACAA GCACCTGTAT ACTTATACGG TATCAATAGA
TTAGGAGTCC CTGATTCTGC CTTCCTTTTA GGTAAGGGAC TCAATTTTAT TGTTCCAGCA
GTGCTTATCT TAGTAACAGG AACTATTTTC GCAATGTGGT TGGGTGAGAA AATCACTGAT
AAAGGAATAG GTAACGGTAT TTCCCTTCTC ATTATGGTAG GTATCATCGC CCGCTTGCCT
CGCGCATTCT TGTCTGAAAC AGCCTCTCGC CTTACTGGTA ACGGAGGTCC CCTATTGATT
CTTATCGAGA TTATCCTCTG GTTCGTAATC ATCCTGCTTT GTATTTATCT AATCAAAGCA
GTACGTCAAA TCCCAGTACA GTATGCACGC AGAACAGCTG ATGGAGGAAC TACTAACGAG
AGAAACATCT TCGGAGCTCG CCAATACATT CCTTTAAAAA TTAACGCTGC AGGGGTAATG
CCTATCATCT TCGCTCAAGC CTTGATGTTT ATCCCAGCCA CTGTAGCCGG ACTATCACAA
TCAGAATTTG CAAAAAGTGT TCAAGCAGCC TTCTCCAACG TCTTTGGATT TTGGTACAAC
CTGCTATTTG CAGCTATGAT TATACTCTTT ACGTATTTCT ATACTGCAAT CACAGTGCCT
ACAAACAAAA TGGCTGATGA CCTAAAACGC AGCGGAGGTT TCATCCCAGG CATACGCCCA
GGTAAAGAAA CAGGCGACTA TTTAGATAAA ATTATGTCGC TTATCACTCT CCCAGGTTCT
ATATTTATAG CCTTGGTAGC GATATTTCCT TCTCTGCTCA AAATCATCGG AATGCAAGAC
CAATGGGCAT TGTTCTACGG TGGTACATCA CTACTCATCT TAGTAGGGGT TGCTATTGAT
ACTATGCAAC AAGTAAATTC ATATCTGCTC AATCGCCATT ATGATGGTTT GATGAAAACA
GGTAAAAACA GAAAAGTATC TTAA
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| Protein sequence | MKKFIENLTN IWKIEELKNR IILTLGILLV YRFGAHIVLP GIDSAQLHEL ATKTSGGGLL
DILNAFTGGA FSNASVFALG IMPYISASIV VQLMGIAIPY LQKLQKEGES GRRKINQITR
WLTIAICIVQ APVYLYGINR LGVPDSAFLL GKGLNFIVPA VLILVTGTIF AMWLGEKITD
KGIGNGISLL IMVGIIARLP RAFLSETASR LTGNGGPLLI LIEIILWFVI ILLCIYLIKA
VRQIPVQYAR RTADGGTTNE RNIFGARQYI PLKINAAGVM PIIFAQALMF IPATVAGLSQ
SEFAKSVQAA FSNVFGFWYN LLFAAMIILF TYFYTAITVP TNKMADDLKR SGGFIPGIRP
GKETGDYLDK IMSLITLPGS IFIALVAIFP SLLKIIGMQD QWALFYGGTS LLILVGVAID
TMQQVNSYLL NRHYDGLMKT GKNRKVS
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