Gene Coch_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1163 
Symbol 
ID8367585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1378591 
End bp1378947 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content38% 
IMG OID644983589 
Productribosomal protein L18 
Protein accessionYP_003141277 
Protein GI256819998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000618231 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAT CAAGAATAGA AAGAAGACAA CGTATTAAAA GCAGAATCAG AAAAGTAGTA 
AAAGGTACTG CTGAACAACC TCGTTTGGCT GTTTTCAGAA GTAATAACGA AATCTATGTA
CAAATCATAG ACGATACTAA AGGTACTACT CTGTTGGCTG CATCTTCACG TGATAAAGAA
ATTAGTGCCG CCAAAGGTAC TAAAACTGAA AAAGCAGCAT TGGTCGGTAA AGCTATTGCT
GAAAAAGCTT TGAAACAAGG TATCGAAAAA GTATCCTTCG ATCGCGGAGG ATACCTTTAC
CACGGACGTG TAAAATCATT AGCCGATGGT GCTAGAGAAG GCGGACTTAA ATTCTAA
 
Protein sequence
MALSRIERRQ RIKSRIRKVV KGTAEQPRLA VFRSNNEIYV QIIDDTKGTT LLAASSRDKE 
ISAAKGTKTE KAALVGKAIA EKALKQGIEK VSFDRGGYLY HGRVKSLADG AREGGLKF