| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1147 |
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| Symbol | rplC |
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| ID | 8367569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1371305 |
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| End bp | 1371922 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983573 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_003141261 |
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| Protein GI | 256819982 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000530687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGGGT TAATCGGAAA AAAAGTAGGA ATGACCAGTA TTTTTGATGA GAACGGAAAA
AATATTCCTT GTACCATCAT CGAAGCAGGT CCTTGCGTAG TTACCCAAGT CAGAACCAAA
GAGGTTGATG GCTATGATGC TCTTCAACTT GGTTTCGATG ACAAAGCAGA AAAACGTGCT
ACCAAAGCAG AGCTTGGTCA CTTCAAAAAA GCAGGTACTT CTGTAAAGAA AAAAGTTGTT
GAATTCCAAG GTTTTGAAGA CAATTACAAA TTAGGTGATA CTATCACCGT AGATTTCTTC
ACCGAAGGAG AGTTTGTGGA TATCACAGGC GTTTCTAAAG GTAAAGGTTT CCAAGGGGTG
GTACGTCGCC ACGGTTTTGG CGGAGTAGGT CAAACTACTC ACGGTCAGCA CAACCGCCTC
AGGGCACCAG GTTCAGTAGG TGCTTCGTCT TACCCTTCTC GCGTATTCAA AGGTATGCGT
ATGGCTGGAC GTATGGGAGC TGAAAAGGTA ACAGTACAAA ACTTGAAAGT ATTGAAAGTG
GTTGCTGAGA AAAATCTTTT AGTCGTAAAA GGTTGTATTC CAGGTCACAA AAATGCTTAC
GTAACTATTC ACAAATAA
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| Protein sequence | MSGLIGKKVG MTSIFDENGK NIPCTIIEAG PCVVTQVRTK EVDGYDALQL GFDDKAEKRA
TKAELGHFKK AGTSVKKKVV EFQGFEDNYK LGDTITVDFF TEGEFVDITG VSKGKGFQGV
VRRHGFGGVG QTTHGQHNRL RAPGSVGASS YPSRVFKGMR MAGRMGAEKV TVQNLKVLKV
VAEKNLLVVK GCIPGHKNAY VTIHK
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